CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038625_P001	Maize	plastid	95.45	95.75
Os05t0503300-02	Rice	plastid	90.27	89.7
TraesCS1D01G324200.1	Wheat	plastid	88.85	88.99
TraesCS1A01G323400.1	Wheat	golgi	88.38	88.66
TraesCS1B01G336300.1	Wheat	plastid	88.38	88.52
HORVU1Hr1G065770.1	Barley	plastid	86.5	88.02
HORVU7Hr1G034450.1	Barley	cytosol	44.74	87.96
HORVU7Hr1G063980.1	Barley	cytosol	49.45	84.0
HORVU0Hr1G026700.1	Barley	plastid	87.13	82.96
HORVU6Hr1G078400.1	Barley	cytosol	26.37	82.76
HORVU2Hr1G007660.2	Barley	cytosol	49.61	82.51
GSMUA_Achr6P25020_001	Banana	plastid	75.04	74.92
CDY66993	Canola	plastid	57.93	71.51
AT5G04590.1	Thale cress	plastid	71.43	70.87
CDY00681	Canola	plastid	70.96	70.3
CDY44868	Canola	plastid	71.11	70.23
CDY41362	Canola	plastid	70.33	70.11
Bra034128.1-P	Field mustard	plastid	70.17	70.06
CDX73918	Canola	plastid	70.33	69.67
CDX70213	Canola	plastid	70.64	69.55
Bra009441.1-P	Field mustard	plastid	70.64	69.55
Bra001368.1-P	Field mustard	plastid	70.17	69.52
GSMUA_Achr1P22900_001	Banana	plastid	73.94	68.46
VIT_06s0004g02330.t01	Wine grape	plastid	72.37	67.1
KRH24061	Soybean	nucleus	72.37	67.01
KRH29037	Soybean	nucleus	72.21	66.96
Solyc11g065620.1.1	Tomato	plastid	70.96	65.41
PGSC0003DMT400026666	Potato	extracellular	70.64	65.12
EES07578	Sorghum	plastid	20.25	21.75

Protein Annotations

KEGG:00920+1.8.1.2	KEGG:00920+1.8.7.1	MapMan:25.2.1.4	Gene3D:3.30.413.10	Gene3D:3.90.480.10	EntrezGene:8080077
UniProt:C5Z0R1	EnsemblPlants:EES19776	ProteinID:EES19776	ProteinID:EES19776.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016002	GO:GO:0016491
GO:GO:0019419	GO:GO:0020037	GO:GO:0050311	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114
InterPro:NO2/SO3_Rdtase_4Fe4S_dom	InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS	InterPro:NiRdtase/SiRdtase_haem-b_fer	InterPro:Nit/Sulf_reduc_fer_like_dom_sf	PFAM:PF01077	PFAM:PF03460
PRINTS:PR00397	ScanProsite:PS00365	PANTHER:PTHR11493	PANTHER:PTHR11493:SF48	MetaCyc:PWY-6683	EnsemblPlantsGene:SORBI_3009G189400
SUPFAM:SSF55124	SUPFAM:SSF56014	unigene:Sbi.12807	InterPro:SiR_ferredoxin-dep	TIGRFAMs:TIGR02042	UniParc:UPI0001A88FF2
RefSeq:XP_002441346.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:54132846..54137539

Molecular Weight (calculated)

70290.0 Da

IEP (calculated)

8.837

GRAVY (calculated)

-0.377

Length

637 amino acids

Sequence
(BLAST)

001: MSAAIRGAEF PGFRGAAAQL PRSRMLGRPI RVAPPAAAQP GGGGASAGSI RAVSAPAKKD ASEVKRSKVE IIKEKSNFLR YPLNEELVSE APNINESAVQ
101: LIKFHGSYQQ TDRDVRGQKN YSFMLRTKNP CGKVPNQLYL AMDTLADEFG IGTLRLTTRQ TFQLHGVLKK NLKTVLSTVI KNMGSTLGAC GDLNRNVLAP
201: AAPYVKKDIL FAQQTAENIA TLLTPQSGAY YDLWVDGEKI MSAEEPPEVT KARNDNSHGT NFPDSPEPIY GTQYLPRKFK VAVTAAGDNS VDILTNDIGV
301: VVVSDDAGEP IGFNIYVGGG MGRTHRVETT FPRLADPLGY VPKEDILYAI KAIVVTQREN GRRDDRKYSR MKYLIDRWGI DKFRAEVEKY YGKKFESFRP
401: LPEWQFNSYL GWQEQGDGKL FYGVHVDNGR VGGQAKKTLR EIIEKYNLDV SITPNQNLIL CGIDQAWREP ITTALAQAGL LEPQDVDPLN LTSMACPALP
501: LCPLAQTEAE RGILPILKRI RTVFNKVGIK DSESVVVRIT GCPNGCARPY MAELGFVGDG PKSYQIWLGG TPNQSTLAES FMDKVKLDDI EKVLEPLFSY
601: WNSTRQEGES FGSFTNRTGF DKLKDVVNKW AESPSAA

Best Arabidopsis Sequence Match ( AT5G04590.1 )
(BLAST)

001: MSSTFRAPAG AATVFTADQK IRLGRLDALR SSHSVFLGRY GRGGVPVPPS ASSSSSSPIQ AVSTPAKPET ATKRSKVEII KEKSNFIRYP LNEELLTEAP
101: NVNESAVQLI KFHGSYQQYN REERGGRSYS FMLRTKNPSG KVPNQLYLTM DDLADEFGIG TLRLTTRQTF QLHGVLKQNL KTVMSSIIKN MGSTLGACGD
201: LNRNVLAPAA PYVKKDYLFA QETADNIAAL LSPQSGFYYD MWVDGEQFMT AEPPEVVKAR NDNSHGTNFV DSPEPIYGTQ FLPRKFKVAV TVPTDNSVDL
301: LTNDIGVVVV SDENGEPQGF NIYVGGGMGR THRMESTFAR LAEPIGYVPK EDILYAVKAI VVTQREHGRR DDRKYSRMKY LISSWGIEKF RDVVEQYYGK
401: KFEPSRELPE WEFKSYLGWH EQGDGAWFCG LHVDSGRVGG IMKKTLREVI EKYKIDVRIT PNQNIVLCDI KTEWKRPITT VLAQAGLLQP EFVDPLNQTA
501: MACPAFPLCP LAITEAERGI PSILKRVRAM FEKVGLDYDE SVVIRVTGCP NGCARPYMAE LGLVGDGPNS YQVWLGGTPN LTQIARSFMD KVKVHDLEKV
601: CEPLFYHWKL ERQTKESFGE YTTRMGFEKL KELIDTYKGV SQ

Arabidopsis Description

SIRSIR [Source:UniProtKB/TrEMBL;Acc:A0A178UPZ1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.