CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44868	Canola	plastid	94.59	94.88
Bra009441.1-P	Field mustard	plastid	94.59	94.59
AT5G04590.1	Thale cress	plastid	92.43	93.15
CDY00681	Canola	plastid	89.03	89.58
CDY66993	Canola	plastid	71.41	89.53
CDX73918	Canola	plastid	88.87	89.42
CDY41362	Canola	plastid	87.48	88.58
HORVU7Hr1G034450.1	Barley	cytosol	39.72	79.32
HORVU6Hr1G078400.1	Barley	cytosol	23.49	74.88
GSMUA_Achr6P25020_001	Banana	plastid	73.11	74.14
HORVU7Hr1G063980.1	Barley	cytosol	42.81	73.87
HORVU2Hr1G007660.2	Barley	cytosol	42.97	72.58
Zm00001d038625_P001	Maize	plastid	69.86	71.18
TraesCS1A01G323400.1	Wheat	golgi	69.86	71.18
VIT_06s0004g02330.t01	Wine grape	plastid	75.58	71.18
KRH24061	Soybean	nucleus	75.58	71.08
HORVU1Hr1G065770.1	Barley	plastid	68.62	70.93
TraesCS1D01G324200.1	Wheat	plastid	69.71	70.91
PGSC0003DMT400026666	Potato	extracellular	75.73	70.91
Solyc11g065620.1.1	Tomato	plastid	75.58	70.77
KRH29037	Soybean	nucleus	75.12	70.74
EES19776	Sorghum	plastid	69.55	70.64
TraesCS1B01G336300.1	Wheat	plastid	69.4	70.6
Os05t0503300-02	Rice	plastid	68.62	69.27
GSMUA_Achr1P22900_001	Banana	plastid	73.11	68.75
HORVU0Hr1G026700.1	Barley	plastid	70.02	67.71
HORVU6Hr1G071510.2	Barley	cytosol	13.14	59.03
CDY69481	Canola	mitochondrion	17.77	25.0
CDY72359	Canola	plastid	14.68	23.11
CDX71230	Canola	plastid	20.56	22.7
CDY36642	Canola	plastid	20.4	22.53
CDY37232	Canola	plastid	19.78	21.92
Os02t0765800-00	Rice	peroxisome	3.71	19.67

Protein Annotations

KEGG:00920+1.8.1.2	KEGG:00920+1.8.7.1	MapMan:25.2.1.4	Gene3D:3.30.413.10	Gene3D:3.90.480.10	GO:A0A078C5F1
EnsemblPlants:CDX70213	ProteinID:CDX70213	ProteinID:CDX70213.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0020037	GO:GO:0050311	GO:GO:0051536
GO:GO:0051539	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00136337001	InterPro:NO2/SO3_Rdtase_4Fe4S_dom	InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS	InterPro:NiRdtase/SiRdtase_haem-b_fer
InterPro:Nit/Sulf_reduc_fer_like_dom_sf	PFAM:PF01077	PFAM:PF03460	PRINTS:PR00397	ScanProsite:PS00365	PANTHER:PTHR11493
PANTHER:PTHR11493:SF58	MetaCyc:PWY-6683	SUPFAM:SSF55124	SUPFAM:SSF56014	InterPro:SiR_ferredoxin-dep	TIGRFAMs:TIGR02042
UniPathway:UPA00140	UniParc:UPI0004EE2707	SEG:seg	:	:	:

Description

BnaA10g25620D

Coordinates

chrLK031790:-:3567704..3570820

Molecular Weight (calculated)

72491.6 Da

IEP (calculated)

8.696

GRAVY (calculated)

-0.405

Length

647 amino acids

Sequence
(BLAST)

001: MSSSSSSFRS PAGAAATLFS SDQKIRLGRL DVLRSSHSAF LGRRNPRGVV SVHPSSSSSS PSPIQAVSTP SKPEAATKRS KVEIIKEKSN FIRYPLNEEL
101: LTEAPNVNES AVQLIKFHGS YQQYNREERG GRSYSFMLRT KNPSGKVPNQ LYLTMDDLAD EFGIGTLRLT TRQTFQLHGV LKQNLKTVMS SIIRNMGSTL
201: GACGDLNRNV LAPAAPYVKK DYLFAQETAD NIAALLSPQS GFYYDMWVDG EQFMTAEPPE VVKARNDNSH GTNFVDSPEP IYGTQFLPRK FKVAVTVPTD
301: NSVDLLTNDI GVVVVSDENG EPQGFNLYVG GGMGRTHRME STFARLAEPL GYVPKEDILY AVKAIVVTQR EHGRRDDRKY SRMKYLVSSW GIEKFKDVVE
401: QYYGKKFEPS RELPEWEFKS YLGWHEQGDG AWFCGLHVDS GRVGGIMKKT LREVIEKYKI DVRITPNQNI VLCDIKTEWK RPITTVLAQA GLLQPEFVDP
501: LNQTAMACPA FPLCPLAITE AERGIPSILK RVRAMFEKVG LEYEESVVIR VTGCPNGCAR PYMAELGLVG DGPNSYQVWL GGTPNQTQIA RSFMDKVKVH
601: DLEKVFEPLF YHWKVDRETK ESFGEFTTRM GFEKLKELIG TYKGGLQ

Best Arabidopsis Sequence Match ( AT5G04590.1 )
(BLAST)

001: MSSTFRAPAG AATVFTADQK IRLGRLDALR SSHSVFLGRY GRGGVPVPPS ASSSSSSPIQ AVSTPAKPET ATKRSKVEII KEKSNFIRYP LNEELLTEAP
101: NVNESAVQLI KFHGSYQQYN REERGGRSYS FMLRTKNPSG KVPNQLYLTM DDLADEFGIG TLRLTTRQTF QLHGVLKQNL KTVMSSIIKN MGSTLGACGD
201: LNRNVLAPAA PYVKKDYLFA QETADNIAAL LSPQSGFYYD MWVDGEQFMT AEPPEVVKAR NDNSHGTNFV DSPEPIYGTQ FLPRKFKVAV TVPTDNSVDL
301: LTNDIGVVVV SDENGEPQGF NIYVGGGMGR THRMESTFAR LAEPIGYVPK EDILYAVKAI VVTQREHGRR DDRKYSRMKY LISSWGIEKF RDVVEQYYGK
401: KFEPSRELPE WEFKSYLGWH EQGDGAWFCG LHVDSGRVGG IMKKTLREVI EKYKIDVRIT PNQNIVLCDI KTEWKRPITT VLAQAGLLQP EFVDPLNQTA
501: MACPAFPLCP LAITEAERGI PSILKRVRAM FEKVGLDYDE SVVIRVTGCP NGCARPYMAE LGLVGDGPNS YQVWLGGTPN LTQIARSFMD KVKVHDLEKV
601: CEPLFYHWKL ERQTKESFGE YTTRMGFEKL KELIDTYKGV SQ

Arabidopsis Description

SIRSIR [Source:UniProtKB/TrEMBL;Acc:A0A178UPZ1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.