Factsheet for HORVU6Hr1G078400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G034450.1	Barley	cytosol	82.27	51.54
HORVU7Hr1G063980.1	Barley	cytosol	79.31	42.93
HORVU2Hr1G007660.2	Barley	cytosol	80.3	42.56
CDY66993	Canola	plastid	73.4	28.88
HORVU1Hr1G065770.1	Barley	plastid	87.19	28.27
TraesCS1A01G323400.1	Wheat	golgi	86.7	27.72
TraesCS1D01G324200.1	Wheat	plastid	86.7	27.67
TraesCS1B01G336300.1	Wheat	plastid	86.21	27.52
Os05t0503300-02	Rice	plastid	84.24	26.68
HORVU0Hr1G026700.1	Barley	plastid	87.19	26.46
Zm00001d038625_P001	Maize	plastid	82.76	26.46
EES19776	Sorghum	plastid	82.76	26.37
GSMUA_Achr6P25020_001	Banana	plastid	75.37	23.98
AT5G04590.1	Thale cress	plastid	75.37	23.83
CDY00681	Canola	plastid	74.88	23.64
CDY41362	Canola	plastid	74.38	23.63
CDY44868	Canola	plastid	74.88	23.57
Bra034128.1-P	Field mustard	plastid	73.89	23.51
CDX70213	Canola	plastid	74.88	23.49
CDX73918	Canola	plastid	74.38	23.48
Bra001368.1-P	Field mustard	plastid	74.38	23.48
Bra009441.1-P	Field mustard	plastid	74.38	23.34
GSMUA_Achr1P22900_001	Banana	plastid	75.37	22.24
KRH29037	Soybean	nucleus	73.89	21.83
VIT_06s0004g02330.t01	Wine grape	plastid	73.89	21.83
KRH24061	Soybean	nucleus	73.89	21.8
Solyc11g065620.1.1	Tomato	plastid	72.91	21.42
PGSC0003DMT400026666	Potato	extracellular	72.41	21.27
HORVU6Hr1G080750.4	Barley	plastid	15.27	4.68
HORVU6Hr1G071510.2	Barley	cytosol	0.99	1.39

Protein Annotations

KEGG:00920+1.8.1.2	MapMan:25.2.1.4	Gene3D:3.30.413.10	Gene3D:3.90.480.10	UniProt:A0A287UTC1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0020037
GO:GO:0051536	GO:GO:0055114	EnsemblPlantsGene:HORVU6Hr1G078400	EnsemblPlants:HORVU6Hr1G078400.1	InterPro:NO2/SO3_Rdtase_4Fe4S_dom	InterPro:NiRdtase/SiRdtase_haem-b_fer
InterPro:Nit/Sulf_reduc_fer_like_dom_sf	PFAM:PF01077	PFAM:PF03460	PANTHER:PTHR11493	PANTHER:PTHR11493:SF48	SUPFAM:SSF55124
SUPFAM:SSF56014	UniParc:UPI000B46D469	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:534466747..534469705

Molecular Weight (calculated)

22324.8 Da

IEP (calculated)

6.006

GRAVY (calculated)

-0.094

Length

203 amino acids

Sequence
(BLAST)

001: MLRTKNFSGK VPNQLYLAMD TLADEFGIGT LRLTTRQTFQ LHDVLKKNLK HVISTVIKNM GSTLVACGDL NRNVLASVAP YVRKDILFAQ ETTENIAALL
101: APQSGAYYDL WVDGEKIMSA KEPPEVTKAR NDNSHGTNFP DSPEPIHGTQ YLPRMFKIAV TVAGDNSVDI LTNDIGVVVV SYMQGSLLAL TSMLEVAWEG
201: HTE

Best Arabidopsis Sequence Match ( AT5G04590.1 )
(BLAST)

001: MSSTFRAPAG AATVFTADQK IRLGRLDALR SSHSVFLGRY GRGGVPVPPS ASSSSSSPIQ AVSTPAKPET ATKRSKVEII KEKSNFIRYP LNEELLTEAP
101: NVNESAVQLI KFHGSYQQYN REERGGRSYS FMLRTKNPSG KVPNQLYLTM DDLADEFGIG TLRLTTRQTF QLHGVLKQNL KTVMSSIIKN MGSTLGACGD
201: LNRNVLAPAA PYVKKDYLFA QETADNIAAL LSPQSGFYYD MWVDGEQFMT AEPPEVVKAR NDNSHGTNFV DSPEPIYGTQ FLPRKFKVAV TVPTDNSVDL
301: LTNDIGVVVV SDENGEPQGF NIYVGGGMGR THRMESTFAR LAEPIGYVPK EDILYAVKAI VVTQREHGRR DDRKYSRMKY LISSWGIEKF RDVVEQYYGK
401: KFEPSRELPE WEFKSYLGWH EQGDGAWFCG LHVDSGRVGG IMKKTLREVI EKYKIDVRIT PNQNIVLCDI KTEWKRPITT VLAQAGLLQP EFVDPLNQTA
501: MACPAFPLCP LAITEAERGI PSILKRVRAM FEKVGLDYDE SVVIRVTGCP NGCARPYMAE LGLVGDGPNS YQVWLGGTPN LTQIARSFMD KVKVHDLEKV
601: CEPLFYHWKL ERQTKESFGE YTTRMGFEKL KELIDTYKGV SQ

Arabidopsis Description

SIRSIR [Source:UniProtKB/TrEMBL;Acc:A0A178UPZ1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.