Factsheet for HORVU6Hr1G080750.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075560.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G15620.1	HORVU1Hr1G075560.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G313100.1	Wheat	plastid	85.95	95.31
TraesCS6A01G333900.1	Wheat	plastid	85.35	94.64
TraesCS6B01G364600.1	Wheat	plastid	86.25	90.63
EES07578	Sorghum	plastid	76.59	85.5
Os02t0765900-00	Rice	cytosol	35.5	84.53
Zm00001d052165_P001	Maize	plastid	74.62	82.75
Zm00001d052164_P002	Maize	plastid	74.62	82.75
Zm00001d018161_P001	Maize	plastid	74.17	81.02
Os01t0357100-02	Rice	plastid	75.68	79.9
CDY69481	Canola	mitochondrion	54.23	78.04
Bra039844.1-P	Field mustard	cytosol	58.31	76.13
AT2G15620.1	Thale cress	plastid	63.9	72.18
CDY37232	Canola	plastid	63.6	72.09
PGSC0003DMT400021310	Potato	plastid	63.44	71.92
PGSC0003DMT400066399	Potato	cytosol	63.75	71.89
CDY36642	Canola	plastid	63.6	71.84
Solyc01g108630.2.1	Tomato	plastid	63.6	71.72
CDX71230	Canola	plastid	63.44	71.67
Solyc10g050890.1.1	Tomato	plastid	62.84	71.23
CDY72359	Canola	plastid	44.11	71.05
GSMUA_Achr9P15320_001	Banana	plastid	65.86	71.01
Bra015227.1-P	Field mustard	plastid	62.69	70.46
VIT_03s0063g00370.t01	Wine grape	plastid	62.84	69.92
KRH71138	Soybean	plastid, vacuole	63.6	69.59
KRH50280	Soybean	plastid	63.14	68.3
HORVU1Hr1G065770.1	Barley	plastid	19.79	20.93
HORVU7Hr1G063980.1	Barley	cytosol	11.63	20.53
HORVU7Hr1G034450.1	Barley	cytosol	9.82	20.06
HORVU0Hr1G026700.1	Barley	plastid	19.94	19.73
HORVU2Hr1G007660.2	Barley	cytosol	11.18	19.32
HORVU6Hr1G071510.2	Barley	cytosol	3.78	17.36
HORVU6Hr1G078400.1	Barley	cytosol	4.68	15.27

Protein Annotations

KEGG:00920+1.8.1.2	MapMan:25.1.4.2	Gene3D:3.30.413.10	Gene3D:3.90.480.10	Gene3D:3.90.480.20	UniProt:A0A287UVZ7
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0010167	GO:GO:0016020	GO:GO:0016491	GO:GO:0020037
GO:GO:0048046	GO:GO:0051536	GO:GO:0055114	EnsemblPlantsGene:HORVU6Hr1G080750	EnsemblPlants:HORVU6Hr1G080750.4	InterPro:NO2/SO3_Rdtase_4Fe4S_dom
InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS	InterPro:NiRdtase/SiRdtase_haem-b_fer	InterPro:Nit/Sulf_reduc_fer_like_dom_sf	PFAM:PF01077	PFAM:PF03460	PRINTS:PR00397
ScanProsite:PS00365	PANTHER:PTHR32439	PANTHER:PTHR32439:SF0	SUPFAM:SSF55124	SUPFAM:SSF56014	UniParc:UPI000B4866DD
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:542691009..542694238

Molecular Weight (calculated)

73072.6 Da

IEP (calculated)

7.174

GRAVY (calculated)

-0.334

Length

662 amino acids

Sequence
(BLAST)

001: IYNHTHHTHG HHHHHHHHRH RAAAAAPPPP QPQAASMASS ASLQSFLPPS AHAATSSSRL RPSRARPVQC AAVSAPSSSS SSASPSASAV PSERLEPRVE
101: QREGGYWVLK EKYRTSLNPQ EKVKLGKEPM ALFTEGGIND LAKLPMEQID ADKLTKEDVD VRLKWLGLFH RRKQQDGRFM MRLKLPNGVT TSEQTRYLAS
201: VIDKYGEEGC ADVTTRQNWQ IRGVTLPDVP EILDGLRSVG LTSLQSGMDN VRNPVGSPLA GIDPLEIVDT RPYTNLLSSY ITNNSEGNLA ITNLYVLLIL
301: HSCIGGDHDR GLPLTMLCMS SPRKWNVCVI GTHDLYEHPH INDLAYMPAE KDGKFGFNLL VGGFISPKRW GEALPLDAWV PGDDIIPVCK AVLEAFRDLG
401: TRGNRQKTRM MWLIDELGME AFRSEIEKRM PNGVLERAAP EDLIDKKWER RDYLGVHPQK QEGLSFVGLH VPVGRLQAAD MFELARLADE YGSGELRLTV
501: EQNIVLPNVK NEKVDALLAE PLLHKFSAHP SLLMKGLVAC TGNQFCGQAI IETKARALQV TRDVEARVSV PKAVRMHWTG CPNSCAQVQV ADIGFMGCLT
601: KNSSGKIVEA ADIFVGGRIG SDSHLTGVYK KAVPCEDLVP IVADLLVERF GAVPREREED EE

Best Arabidopsis Sequence Match ( AT2G15620.1 )
(BLAST)

001: MTSFSLTFTS PLLPSSSTKP KRSVLVAAAQ TTAPAESTAS VDADRLEPRV ELKDGFFILK EKFRKGINPQ EKVKIEREPM KLFMENGIEE LAKKSMEELD
101: SEKSSKDDID VRLKWLGLFH RRKHQYGKFM MRLKLPNGVT TSAQTRYLAS VIRKYGEDGC ADVTTRQNWQ IRGVVLPDVP EILKGLASVG LTSLQSGMDN
201: VRNPVGNPIA GIDPEEIVDT RPYTNLLSQF ITANSQGNPD FTNLPRKWNV CVVGTHDLYE HPHINDLAYM PANKDGRFGF NLLVGGFFSP KRCEEAIPLD
301: AWVPADDVLP LCKAVLEAYR DLGTRGNRQK TRMMWLIDEL GVEGFRTEVE KRMPNGKLER GSSEDLVNKQ WERRDYFGVN PQKQEGLSFV GLHVPVGRLQ
401: ADDMDELARL ADTYGSGELR LTVEQNIIIP NVETSKTEAL LQEPFLKNRF SPEPSILMKG LVACTGSQFC GQAIIETKLR ALKVTEEVER LVSVPRPIRM
501: HWTGCPNTCG QVQVADIGFM GCLTRGEEGK PVEGADVYVG GRIGSDSHIG EIYKKGVRVT ELVPLVAEIL IKEFGAVPRE REENED

Arabidopsis Description

NIR1Ferredoxin--nitrite reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39161]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.