Factsheet for PGSC0003DMT400021310

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g050890.1.1	Tomato	plastid	94.01	94.01
PGSC0003DMT400066399	Potato	cytosol	85.1	84.67
CDY69481	Canola	mitochondrion	64.9	82.39
Bra039844.1-P	Field mustard	cytosol	70.21	80.87
Os02t0765900-00	Rice	cytosol	37.5	78.78
VIT_03s0063g00370.t01	Wine grape	plastid	78.77	77.31
AT2G15620.1	Thale cress	plastid	77.05	76.79
CDX71230	Canola	plastid	76.71	76.45
CDY36642	Canola	plastid	76.71	76.45
CDY72359	Canola	plastid	53.77	76.4
Bra015227.1-P	Field mustard	plastid	76.03	75.38
CDY37232	Canola	plastid	75.34	75.34
KRH71138	Soybean	plastid, vacuole	77.74	75.04
KRH50280	Soybean	plastid	77.05	73.53
EES07578	Sorghum	plastid	73.97	72.85
Zm00001d052164_P002	Maize	plastid	72.6	71.02
Zm00001d052165_P001	Maize	plastid	72.6	71.02
GSMUA_Achr9P15320_001	Banana	plastid	74.66	71.01
TraesCS6A01G333900.1	Wheat	plastid	72.09	70.52
TraesCS6D01G313100.1	Wheat	plastid	71.92	70.35
Zm00001d018161_P001	Maize	plastid	72.09	69.47
TraesCS6B01G364600.1	Wheat	plastid	72.43	67.14
Os01t0357100-02	Rice	plastid	71.06	66.19
HORVU6Hr1G080750.4	Barley	plastid	71.92	63.44
PGSC0003DMT400026666	Potato	extracellular	23.46	19.83

Protein Annotations

KEGG:00920+1.8.1.2	EntrezGene:102596437	MapMan:25.1.4.2	Gene3D:3.30.413.10	Gene3D:3.90.480.20	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0020037	GO:GO:0051536	GO:GO:0055114	UniProt:M1AEW6	InterPro:NO2/SO3_Rdtase_4Fe4S_dom	InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS
InterPro:NiRdtase/SiRdtase_haem-b_fer	InterPro:Nit/Sulf_reduc_fer_like_dom_sf	PFAM:PF01077	PFAM:PF03460	EnsemblPlantsGene:PGSC0003DMG400008262	PGSC:PGSC0003DMG400008262
EnsemblPlants:PGSC0003DMT400021310	PRINTS:PR00397	ScanProsite:PS00365	PANTHER:PTHR32439	PANTHER:PTHR32439:SF0	SUPFAM:SSF55124
SUPFAM:SSF56014	UniParc:UPI000295FAA3	RefSeq:XP_006349625.1	SEG:seg	:	:

Description

Nitrite reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400008262]

Coordinates

chr10:-:43477213..43479726

Molecular Weight (calculated)

65661.1 Da

IEP (calculated)

7.108

GRAVY (calculated)

-0.402

Length

584 amino acids

Sequence
(BLAST)

001: MTSFSVKFSA TSLPNSNRFS KLHATPPQTV AVPSSGAAEI AAERLEPRVE QKDGYWVLKE KFRQGINPAE KAKIEKEPMK LFTENGIEDL AKISLEEMEK
101: SKLTKEDIDI RLKWLGLFHR RKHHYGRFMM RLKLPNGVTT SAQTRYLASV IRKYGKDGCG DVTTRQNWQI RGVVLPDVPE ILKGLDEVGL TSLQSGMDNV
201: RNPVGNPLAG IDPHEIVDTR PYTNLLSQYV TANFRGNVDV TNLPRKWNVC VIGSHDLYEH PHINDLAYMP ATKDGRFGFN LLVGGFFSPK RCAEAIPLDA
301: WVPADDVVPV CKAILEAYRD LGTRGNRQKT RMMWLIDELG VEGFRAEVVK RMPQQKLERE SAEDLVQKQW ERREYLGVHP QKQEGYSFVG LHIPVGRVQA
401: DDMDELARLA DEYGSGELRL TVEQNIIIPN IENSKIDALL NEPLLKKRFS PDPPILMRNL VACTGNQFCG QAIIETKARS MKITEEVQRL VSVTQPVRMH
501: WTGCPNTCGQ VQVADIGFMG CLTRKEGKTV EGADVFLGGR IGSDSHLGEV YKKSVPCEDL VPIIVDLLVN NFGAVPRERE ETEE

Best Arabidopsis Sequence Match ( AT2G15620.1 )
(BLAST)

001: MTSFSLTFTS PLLPSSSTKP KRSVLVAAAQ TTAPAESTAS VDADRLEPRV ELKDGFFILK EKFRKGINPQ EKVKIEREPM KLFMENGIEE LAKKSMEELD
101: SEKSSKDDID VRLKWLGLFH RRKHQYGKFM MRLKLPNGVT TSAQTRYLAS VIRKYGEDGC ADVTTRQNWQ IRGVVLPDVP EILKGLASVG LTSLQSGMDN
201: VRNPVGNPIA GIDPEEIVDT RPYTNLLSQF ITANSQGNPD FTNLPRKWNV CVVGTHDLYE HPHINDLAYM PANKDGRFGF NLLVGGFFSP KRCEEAIPLD
301: AWVPADDVLP LCKAVLEAYR DLGTRGNRQK TRMMWLIDEL GVEGFRTEVE KRMPNGKLER GSSEDLVNKQ WERRDYFGVN PQKQEGLSFV GLHVPVGRLQ
401: ADDMDELARL ADTYGSGELR LTVEQNIIIP NVETSKTEAL LQEPFLKNRF SPEPSILMKG LVACTGSQFC GQAIIETKLR ALKVTEEVER LVSVPRPIRM
501: HWTGCPNTCG QVQVADIGFM GCLTRGEEGK PVEGADVYVG GRIGSDSHIG EIYKKGVRVT ELVPLVAEIL IKEFGAVPRE REENED

Arabidopsis Description

NIR1Ferredoxin--nitrite reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39161]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.