Factsheet for Bra015227.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G15620.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71230	Canola	plastid	92.87	93.34
CDY36642	Canola	plastid	92.7	93.17
Bra039844.1-P	Field mustard	cytosol	78.61	91.32
CDY72359	Canola	plastid	63.33	90.75
AT2G15620.1	Thale cress	plastid	89.3	89.76
Os02t0765900-00	Rice	cytosol	36.84	78.06
Solyc01g108630.2.1	Tomato	plastid	76.23	76.49
PGSC0003DMT400066399	Potato	cytosol	76.23	76.49
Solyc10g050890.1.1	Tomato	plastid	75.55	76.2
PGSC0003DMT400021310	Potato	plastid	75.38	76.03
VIT_03s0063g00370.t01	Wine grape	plastid	76.06	75.29
KRH71138	Soybean	plastid, vacuole	77.25	75.21
KRH50280	Soybean	plastid	77.76	74.84
EES07578	Sorghum	plastid	71.65	71.16
TraesCS6D01G313100.1	Wheat	plastid	70.8	69.85
Zm00001d052164_P002	Maize	plastid	70.63	69.68
Zm00001d052165_P001	Maize	plastid	70.63	69.68
TraesCS6A01G333900.1	Wheat	plastid	70.63	69.68
GSMUA_Achr9P15320_001	Banana	plastid	72.33	69.38
Zm00001d018161_P001	Maize	plastid	69.44	67.49
Os01t0357100-02	Rice	plastid	70.8	66.51
TraesCS6B01G364600.1	Wheat	plastid	70.63	66.03
HORVU6Hr1G080750.4	Barley	plastid	70.46	62.69
Bra034128.1-P	Field mustard	plastid	22.07	20.38
Bra009441.1-P	Field mustard	plastid	22.24	20.25
Bra001368.1-P	Field mustard	plastid	21.73	19.91

Protein Annotations

KEGG:00920+1.8.1.2	MapMan:25.1.4.2	Gene3D:3.30.413.10	Gene3D:3.90.480.20	EnsemblPlantsGene:Bra015227	EnsemblPlants:Bra015227.1
EnsemblPlants:Bra015227.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0020037	GO:GO:0051536	GO:GO:0055114	UniProt:M4DFF4	InterPro:NO2/SO3_Rdtase_4Fe4S_dom
InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS	InterPro:NiRdtase/SiRdtase_haem-b_fer	InterPro:Nit/Sulf_reduc_fer_like_dom_sf	PFAM:PF01077	PFAM:PF03460	PRINTS:PR00397
ScanProsite:PS00365	PANTHER:PTHR32439	PANTHER:PTHR32439:SF0	SUPFAM:SSF55124	SUPFAM:SSF56014	UniParc:UPI0002544646
SEG:seg	:	:	:	:	:

Description

AT2G15620 (E=8e-313) NIR1, NIR, ATHNIR | NIR1 (NITRITE REDUCTASE 1); ferredoxin-nitrate reductase/ nitrite reductase (NO-forming)

Coordinates

chrA10:-:3182661..3184658

Molecular Weight (calculated)

65812.1 Da

IEP (calculated)

6.706

GRAVY (calculated)

-0.394

Length

589 amino acids

Sequence
(BLAST)

001: MTSSSLSLHF TAPSHTLLPS KPRRSVIVAA QTAHPAESTA SPTVDADRLE PRVELRDGFF ILKEKFRKGI NPQEKVKIES EPMKLFMENG IEELAKKSME
101: EIDSDKSSKE DVDVRLKWLG LFHRRKHHYG KFMMRLKLPN GVTTSAQTRY LASVIRKYGE DGCADVTTRQ NWQIRGVVLP DVPEILKGLA SVGLTSLQSG
201: MDNVRNPVGN PIAGIDPDEI VDTRPYTNLL SQFITANSRG NPDFTNLPRK WNVCVVGTHD LYEHPHINDL AYMPANKDGR FGFNVLVGGF FSPKRCEEAI
301: PLDAWVPAED VLPLCKAVLE AYRDLGTRGN RQKTRMMWLI DELGVEGFRA EVEKRMPSGK LERASSEDLV NKQWERRDYF GVHPQKQEGL SYVGLHVPVG
401: RLQADDMDEL ARLADAYGTG ELRLTVEQNI IIPNVETSKT EALLQEPFLK NRFSPEPSIL MKGLVACTGN QFCGQAIIET KLRALKVTEE VERLVAVPKP
501: IRMHWTGCPN TCGQVQVADI GFMGCLTRGE NGKPVEGADV YVGGRIGSDS HLGEIYKKGV RVTELVPLVA EILIKEFGAV PREREDNED

Best Arabidopsis Sequence Match ( AT2G15620.1 )
(BLAST)

001: MTSFSLTFTS PLLPSSSTKP KRSVLVAAAQ TTAPAESTAS VDADRLEPRV ELKDGFFILK EKFRKGINPQ EKVKIEREPM KLFMENGIEE LAKKSMEELD
101: SEKSSKDDID VRLKWLGLFH RRKHQYGKFM MRLKLPNGVT TSAQTRYLAS VIRKYGEDGC ADVTTRQNWQ IRGVVLPDVP EILKGLASVG LTSLQSGMDN
201: VRNPVGNPIA GIDPEEIVDT RPYTNLLSQF ITANSQGNPD FTNLPRKWNV CVVGTHDLYE HPHINDLAYM PANKDGRFGF NLLVGGFFSP KRCEEAIPLD
301: AWVPADDVLP LCKAVLEAYR DLGTRGNRQK TRMMWLIDEL GVEGFRTEVE KRMPNGKLER GSSEDLVNKQ WERRDYFGVN PQKQEGLSFV GLHVPVGRLQ
401: ADDMDELARL ADTYGSGELR LTVEQNIIIP NVETSKTEAL LQEPFLKNRF SPEPSILMKG LVACTGSQFC GQAIIETKLR ALKVTEEVER LVSVPRPIRM
501: HWTGCPNTCG QVQVADIGFM GCLTRGEEGK PVEGADVYVG GRIGSDSHIG EIYKKGVRVT ELVPLVAEIL IKEFGAVPRE REENED

Arabidopsis Description

NIR1Ferredoxin--nitrite reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39161]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.