CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 5
plasma membrane 3
golgi 3
plastid 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	mitochondrion, plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50280	Soybean	plastid	89.26	88.24
CDY69481	Canola	mitochondrion	64.13	84.35
Bra039844.1-P	Field mustard	cytosol	69.26	82.64
Os02t0765900-00	Rice	cytosol	36.03	78.42
CDY37232	Canola	plastid	75.37	78.08
Solyc01g108630.2.1	Tomato	plastid	75.7	78.02
PGSC0003DMT400066399	Potato	cytosol	75.7	78.02
CDX71230	Canola	plastid	75.54	77.99
CDY36642	Canola	plastid	75.54	77.99
CDY72359	Canola	plastid	52.89	77.86
PGSC0003DMT400021310	Potato	plastid	75.04	77.74
Bra015227.1-P	Field mustard	plastid	75.21	77.25
VIT_03s0063g00370.t01	Wine grape	plastid	75.21	76.47
AT2G15620.1	Thale cress	plastid	73.88	76.28
Solyc10g050890.1.1	Tomato	plastid	73.22	75.86
EES07578	Sorghum	plastid	72.07	73.52
GSMUA_Achr9P15320_001	Banana	plastid	73.55	72.48
Zm00001d018161_P001	Maize	plastid	71.07	70.96
Zm00001d052164_P002	Maize	plastid	69.92	70.85
Zm00001d052165_P001	Maize	plastid	69.92	70.85
TraesCS6A01G333900.1	Wheat	plastid	69.75	70.69
TraesCS6D01G313100.1	Wheat	plastid	69.59	70.52
Os01t0357100-02	Rice	plastid	69.42	66.99
TraesCS6B01G364600.1	Wheat	plastid	69.26	66.51
HORVU6Hr1G080750.4	Barley	plastid	69.59	63.6
KRH29037	Soybean	nucleus	22.64	19.94
KRH24061	Soybean	nucleus	22.31	19.62

Protein Annotations

KEGG:00920+1.8.1.2	MapMan:25.1.4.2	Gene3D:3.30.413.10	Gene3D:3.90.480.20	EntrezGene:732631	EMBL:ACUP02000866
EnsemblPlantsGene:GLYMA_02G132100	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0020037	GO:GO:0048307	GO:GO:0051536	GO:GO:0055114	UniProt:I1JET9
EMBL:KF542817	EnsemblPlants:KRH71138	ProteinID:KRH71138	ProteinID:KRH71138.1	InterPro:NO2/SO3_Rdtase_4Fe4S_dom	InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS
InterPro:NiRdtase/SiRdtase_haem-b_fer	InterPro:Nit/Sulf_reduc_fer_like_dom_sf	PFAM:PF01077	PFAM:PF03460	PRINTS:PR00397	ScanProsite:PS00365
PANTHER:PTHR32439	PANTHER:PTHR32439:SF0	MetaCyc:PWY-6683	SUPFAM:SSF55124	SUPFAM:SSF56014	SignalP:SignalP-noTM
UniParc:UPI0002337A59	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:13635757..13639351

Molecular Weight (calculated)

67620.5 Da

IEP (calculated)

6.931

GRAVY (calculated)

-0.322

Length

605 amino acids

Sequence
(BLAST)

001: MYTFLLLLPI MSSSFSVRFL APLPPSSSSC FPTSSLPKTW LCAAATPTVA PSTTTSSSEV EASRLEPRVE ERDGFWVLKE EYRGGISPQE KVKLEKDPMK
101: LFMEGGIEEL AKMSLEEIES SKHTKDDIDV RLKWLGLFHR RKQHHGRFMM RLKLPNGVTT SAQTRYLASV IRKYGKDGCA DVTTRQNWQI RGVVLPDVPE
201: ILKGLDEVGL TSLQSGMDNV RNPVGNPLAG IDPDEIVDTR PYNNLLSQFI TANSRGNPAM SNLPRKWNVC VVGSHDLFEH PHINDLAYMP ANKDGRFGFN
301: LLVGGFFSAK RCAEAIPLDA WVSADDVIPL CKAVLEAYRD LGFRGNRQKT RMMWLIDELG IEVFRSEVEK RMPGKKLERA SKEELVKKQW ERRDYLGVHP
401: QKQEGLSYVG IHIPVGRVQA DDMDELARLA DEYATGELRL TVEQNIIIPN VDNNKIDGLL NEPLLKGRFS PEPSLLMKTL VACTGNQFCG QAIIETKERA
501: LKVTEEVERQ VAVTRPVRMH WTGCPNTCGQ VQVADIGFMG CMARDDNGKA TEGVDIFLGG RIGSDSHLAQ VYKKGVPCKD LVPVVVDILV KHFGAVLRNR
601: EEGED

Best Arabidopsis Sequence Match ( AT2G15620.1 )
(BLAST)

001: MTSFSLTFTS PLLPSSSTKP KRSVLVAAAQ TTAPAESTAS VDADRLEPRV ELKDGFFILK EKFRKGINPQ EKVKIEREPM KLFMENGIEE LAKKSMEELD
101: SEKSSKDDID VRLKWLGLFH RRKHQYGKFM MRLKLPNGVT TSAQTRYLAS VIRKYGEDGC ADVTTRQNWQ IRGVVLPDVP EILKGLASVG LTSLQSGMDN
201: VRNPVGNPIA GIDPEEIVDT RPYTNLLSQF ITANSQGNPD FTNLPRKWNV CVVGTHDLYE HPHINDLAYM PANKDGRFGF NLLVGGFFSP KRCEEAIPLD
301: AWVPADDVLP LCKAVLEAYR DLGTRGNRQK TRMMWLIDEL GVEGFRTEVE KRMPNGKLER GSSEDLVNKQ WERRDYFGVN PQKQEGLSFV GLHVPVGRLQ
401: ADDMDELARL ADTYGSGELR LTVEQNIIIP NVETSKTEAL LQEPFLKNRF SPEPSILMKG LVACTGSQFC GQAIIETKLR ALKVTEEVER LVSVPRPIRM
501: HWTGCPNTCG QVQVADIGFM GCLTRGEEGK PVEGADVYVG GRIGSDSHIG EIYKKGVRVT ELVPLVAEIL IKEFGAVPRE REENED

Arabidopsis Description

NIR1Ferredoxin--nitrite reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q39161]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.