Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX70213 | Canola | plastid | 93.15 | 92.43 |
| CDY44868 | Canola | plastid | 91.43 | 91.01 |
| Bra009441.1-P | Field mustard | plastid | 91.12 | 90.42 |
| HORVU7Hr1G034450.1 | Barley | cytosol | 39.72 | 78.7 |
| HORVU6Hr1G078400.1 | Barley | cytosol | 23.83 | 75.37 |
| GSMUA_Achr6P25020_001 | Banana | plastid | 74.45 | 74.92 |
| HORVU7Hr1G063980.1 | Barley | cytosol | 42.83 | 73.33 |
| HORVU2Hr1G007660.2 | Barley | cytosol | 43.15 | 72.32 |
| Zm00001d038625_P001 | Maize | plastid | 71.34 | 72.13 |
| KRH29037 | Soybean | nucleus | 76.79 | 71.76 |
| EES19776 | Sorghum | plastid | 70.87 | 71.43 |
| TraesCS1D01G324200.1 | Wheat | plastid | 70.56 | 71.23 |
| TraesCS1A01G323400.1 | Wheat | golgi | 70.41 | 71.18 |
| VIT_06s0004g02330.t01 | Wine grape | plastid | 76.17 | 71.18 |
| HORVU1Hr1G065770.1 | Barley | plastid | 69.31 | 71.09 |
| KRH24061 | Soybean | nucleus | 76.17 | 71.08 |
| Solyc11g065620.1.1 | Tomato | plastid | 76.32 | 70.91 |
| TraesCS1B01G336300.1 | Wheat | plastid | 70.09 | 70.75 |
| PGSC0003DMT400026666 | Potato | extracellular | 76.01 | 70.62 |
| Os05t0503300-02 | Rice | plastid | 69.94 | 70.05 |
| GSMUA_Achr1P22900_001 | Banana | plastid | 74.92 | 69.91 |
| HORVU0Hr1G026700.1 | Barley | plastid | 70.56 | 67.71 |
| HORVU6Hr1G071510.2 | Barley | cytosol | 12.93 | 57.64 |
| AT2G15620.1 | Thale cress | plastid | 20.25 | 22.18 |
| Os02t0765800-00 | Rice | peroxisome | 3.74 | 19.67 |
Protein Annotations
| KEGG:00920+1.8.1.2 | KEGG:00920+1.8.7.1 | MapMan:25.2.1.4 | Gene3D:3.30.413.10 | Gene3D:3.90.480.10 | EntrezGene:830336 |
| UniProt:A0A178UPZ1 | ProteinID:AED90762.1 | EMBL:AF325027 | EMBL:AK229873 | ArrayExpress:AT5G04590 | EnsemblPlantsGene:AT5G04590 |
| RefSeq:AT5G04590 | TAIR:AT5G04590 | RefSeq:AT5G04590-TAIR-G | EnsemblPlants:AT5G04590.1 | TAIR:AT5G04590.1 | EMBL:AY048290 |
| EMBL:BT000593 | ProteinID:CAA71239.1 | ProteinID:CAB85565.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006275 | GO:GO:0006323 |
| GO:GO:0006790 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009409 |
| GO:GO:0009507 | GO:GO:0009532 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009941 | GO:GO:0009987 | GO:GO:0010319 | GO:GO:0016002 | GO:GO:0016020 | GO:GO:0016043 |
| GO:GO:0016491 | GO:GO:0019424 | GO:GO:0020037 | GO:GO:0042644 | GO:GO:0045892 | GO:GO:0046872 |
| GO:GO:0048046 | GO:GO:0050311 | GO:GO:0051536 | GO:GO:0051539 | GO:GO:0055114 | InterPro:NO2/SO3_Rdtase_4Fe4S_dom |
| InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS | RefSeq:NP_196079.1 | InterPro:NiRdtase/SiRdtase_haem-b_fer | InterPro:Nit/Sulf_reduc_fer_like_dom_sf | ProteinID:OAO95725.1 | PFAM:PF01077 |
| PFAM:PF03460 | PO:PO:0000003 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00397 | ScanProsite:PS00365 | PANTHER:PTHR11493 | PANTHER:PTHR11493:SF58 | UniProt:Q9LZ66 | Symbol:SIR |
| SUPFAM:SSF55124 | SUPFAM:SSF56014 | InterPro:SiR_ferredoxin-dep | TIGRFAMs:TIGR02042 | UniParc:UPI0000048AC7 | EMBL:Z49217 |
| SEG:seg | : | : | : | : | : |
Description
SIRSIR [Source:UniProtKB/TrEMBL;Acc:A0A178UPZ1]
Coordinates
chr5:+:1319074..1323364
Molecular Weight (calculated)
71954.1 Da
IEP (calculated)
8.474
GRAVY (calculated)
-0.384
Length
642 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTFRAPAG AATVFTADQK IRLGRLDALR SSHSVFLGRY GRGGVPVPPS ASSSSSSPIQ AVSTPAKPET ATKRSKVEII KEKSNFIRYP LNEELLTEAP
101: NVNESAVQLI KFHGSYQQYN REERGGRSYS FMLRTKNPSG KVPNQLYLTM DDLADEFGIG TLRLTTRQTF QLHGVLKQNL KTVMSSIIKN MGSTLGACGD
201: LNRNVLAPAA PYVKKDYLFA QETADNIAAL LSPQSGFYYD MWVDGEQFMT AEPPEVVKAR NDNSHGTNFV DSPEPIYGTQ FLPRKFKVAV TVPTDNSVDL
301: LTNDIGVVVV SDENGEPQGF NIYVGGGMGR THRMESTFAR LAEPIGYVPK EDILYAVKAI VVTQREHGRR DDRKYSRMKY LISSWGIEKF RDVVEQYYGK
401: KFEPSRELPE WEFKSYLGWH EQGDGAWFCG LHVDSGRVGG IMKKTLREVI EKYKIDVRIT PNQNIVLCDI KTEWKRPITT VLAQAGLLQP EFVDPLNQTA
501: MACPAFPLCP LAITEAERGI PSILKRVRAM FEKVGLDYDE SVVIRVTGCP NGCARPYMAE LGLVGDGPNS YQVWLGGTPN LTQIARSFMD KVKVHDLEKV
601: CEPLFYHWKL ERQTKESFGE YTTRMGFEKL KELIDTYKGV SQ
101: NVNESAVQLI KFHGSYQQYN REERGGRSYS FMLRTKNPSG KVPNQLYLTM DDLADEFGIG TLRLTTRQTF QLHGVLKQNL KTVMSSIIKN MGSTLGACGD
201: LNRNVLAPAA PYVKKDYLFA QETADNIAAL LSPQSGFYYD MWVDGEQFMT AEPPEVVKAR NDNSHGTNFV DSPEPIYGTQ FLPRKFKVAV TVPTDNSVDL
301: LTNDIGVVVV SDENGEPQGF NIYVGGGMGR THRMESTFAR LAEPIGYVPK EDILYAVKAI VVTQREHGRR DDRKYSRMKY LISSWGIEKF RDVVEQYYGK
401: KFEPSRELPE WEFKSYLGWH EQGDGAWFCG LHVDSGRVGG IMKKTLREVI EKYKIDVRIT PNQNIVLCDI KTEWKRPITT VLAQAGLLQP EFVDPLNQTA
501: MACPAFPLCP LAITEAERGI PSILKRVRAM FEKVGLDYDE SVVIRVTGCP NGCARPYMAE LGLVGDGPNS YQVWLGGTPN LTQIARSFMD KVKVHDLEKV
601: CEPLFYHWKL ERQTKESFGE YTTRMGFEKL KELIDTYKGV SQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.