CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73918	Canola	plastid	98.13	98.13
CDY41362	Canola	plastid	92.53	93.11
CDY66993	Canola	plastid	74.65	93.02
CDY44868	Canola	plastid	89.42	89.15
CDX70213	Canola	plastid	89.58	89.03
HORVU7Hr1G034450.1	Barley	cytosol	39.5	78.4
HORVU6Hr1G078400.1	Barley	cytosol	23.64	74.88
GSMUA_Achr6P25020_001	Banana	plastid	74.03	74.61
HORVU7Hr1G063980.1	Barley	cytosol	42.61	73.07
KRH29037	Soybean	nucleus	77.45	72.49
TraesCS1A01G323400.1	Wheat	golgi	71.38	72.28
TraesCS1B01G336300.1	Wheat	plastid	71.38	72.17
Zm00001d038625_P001	Maize	plastid	71.23	72.13
HORVU2Hr1G007660.2	Barley	cytosol	42.92	72.06
TraesCS1D01G324200.1	Wheat	plastid	71.23	72.01
HORVU1Hr1G065770.1	Barley	plastid	69.98	71.89
Solyc11g065620.1.1	Tomato	plastid	76.83	71.49
VIT_06s0004g02330.t01	Wine grape	plastid	76.36	71.47
KRH24061	Soybean	nucleus	76.36	71.37
PGSC0003DMT400026666	Potato	extracellular	76.67	71.35
EES19776	Sorghum	plastid	70.3	70.96
Os05t0503300-02	Rice	plastid	70.14	70.36
GSMUA_Achr1P22900_001	Banana	plastid	73.87	69.04
HORVU0Hr1G026700.1	Barley	plastid	71.54	68.76
HORVU6Hr1G071510.2	Barley	cytosol	13.69	61.11
CDY69481	Canola	mitochondrion	17.42	24.35
CDY72359	Canola	plastid	14.93	23.36
CDX71230	Canola	plastid	20.84	22.87
CDY36642	Canola	plastid	20.68	22.7
CDY37232	Canola	plastid	19.6	21.58
Os02t0765800-00	Rice	peroxisome	3.89	20.49

Protein Annotations

KEGG:00920+1.8.1.2	KEGG:00920+1.8.7.1	MapMan:25.2.1.4	Gene3D:3.30.413.10	Gene3D:3.90.480.10	GO:A0A078EHU7
EnsemblPlants:CDY00681	ProteinID:CDY00681	ProteinID:CDY00681.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0020037	GO:GO:0050311	GO:GO:0051536
GO:GO:0051539	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00110514001	InterPro:NO2/SO3_Rdtase_4Fe4S_dom	InterPro:NO2/SO3_Rdtase_FeS/sirohaem_BS	InterPro:NiRdtase/SiRdtase_haem-b_fer
InterPro:Nit/Sulf_reduc_fer_like_dom_sf	PFAM:PF01077	PFAM:PF03460	PRINTS:PR00397	ScanProsite:PS00365	PANTHER:PTHR11493
PANTHER:PTHR11493:SF58	MetaCyc:PWY-6683	SUPFAM:SSF55124	SUPFAM:SSF56014	InterPro:SiR_ferredoxin-dep	TIGRFAMs:TIGR02042
UniPathway:UPA00140	UniParc:UPI0004EB09C5	SEG:seg	:	:	:

Description

BnaC03g36650D

Coordinates

chrLK031921:+:223956..227519

Molecular Weight (calculated)

71980.1 Da

IEP (calculated)

8.406

GRAVY (calculated)

-0.370

Length

643 amino acids

Sequence
(BLAST)

001: MTTSFRSPAG AATVFSTDQK IRVGILHSLR SSRTVFLGRN VFVGVHSLPP SSSSPSSIQA VSTPAKPEAA KPTKRSKVEI IKEKSNFIRY PLNEELLTES
101: PNVNESAVQL IKFHGSYQQY NREERGGRSY SFMLRTKNPS GKVPNQLYLT MDDLADEFGI GTLRLTTRQT FQLHGVLKHN LKTVMSSIIK NMGSTLGACG
201: DLNRNVLAPA APYAKKDYLF AQETADNIAA LLSPQSGFYY DMWVDGEQFM TAEAPEVVEA RNDNSHGTNF VDSPEPIYGT QFLPRKFKIA VTVPTDNSVD
301: LLTNDIGVVV VSDENGEPQG FNIYVGGGMG RTHRMESTFA RIAEPLGYVP KEDILYAVKA IVVTQREHGR RDDRKYSRMK YLLSSWGIEK FRDVVEQYYG
401: KKFEPPRDLP EWEFKSYLGW HEQGDGALFC GLHVDSGRVG GNMKKTLREV IEKYRLDVRI TPNQNIVLCD IKSEWKRSIT TVLAQAGLLQ PEFVDPLNQT
501: AMACPAFPLC PLAITEAERG IPSILKRVRA MFEKVGLEFD ESVVVRVTGC PNGCARPYMA EVGLVGDGPN SYQVWLGGTP NQTQIARAFM DKVKIQDLEK
601: VFEPLFYNWK LGRQAKESFG EFTTRMGFEK LKELISTYEG SPQ

Best Arabidopsis Sequence Match ( AT5G04590.1 )
(BLAST)

001: MSSTFRAPAG AATVFTADQK IRLGRLDALR SSHSVFLGRY GRGGVPVPPS ASSSSSSPIQ AVSTPAKPET ATKRSKVEII KEKSNFIRYP LNEELLTEAP
101: NVNESAVQLI KFHGSYQQYN REERGGRSYS FMLRTKNPSG KVPNQLYLTM DDLADEFGIG TLRLTTRQTF QLHGVLKQNL KTVMSSIIKN MGSTLGACGD
201: LNRNVLAPAA PYVKKDYLFA QETADNIAAL LSPQSGFYYD MWVDGEQFMT AEPPEVVKAR NDNSHGTNFV DSPEPIYGTQ FLPRKFKVAV TVPTDNSVDL
301: LTNDIGVVVV SDENGEPQGF NIYVGGGMGR THRMESTFAR LAEPIGYVPK EDILYAVKAI VVTQREHGRR DDRKYSRMKY LISSWGIEKF RDVVEQYYGK
401: KFEPSRELPE WEFKSYLGWH EQGDGAWFCG LHVDSGRVGG IMKKTLREVI EKYKIDVRIT PNQNIVLCDI KTEWKRPITT VLAQAGLLQP EFVDPLNQTA
501: MACPAFPLCP LAITEAERGI PSILKRVRAM FEKVGLDYDE SVVIRVTGCP NGCARPYMAE LGLVGDGPNS YQVWLGGTPN LTQIARSFMD KVKVHDLEKV
601: CEPLFYHWKL ERQTKESFGE YTTRMGFEKL KELIDTYKGV SQ

Arabidopsis Description

SIRSIR [Source:UniProtKB/TrEMBL;Acc:A0A178UPZ1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.