Factsheet for Bra037164.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001457.1-P
Bra027469.1-P
Bra038734.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66570.1	Bra001457.1-P	AT3G12580.1	16619024
AT5G66570.1	Bra038734.1-P	AT3G12580.1	16619024
AT5G66570.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18611	Canola	plastid	100.0	100.0
Bra012083.1-P	Field mustard	plastid	98.8	98.8
Bra031813.1-P	Field mustard	plastid	98.49	98.49
AT5G66570.1	Thale cress	plastid	96.99	96.99
Bra038863.1-P	Field mustard	plastid	91.57	91.29
PGSC0003DMT400007189	Potato	cytosol, extracellular, plastid	79.52	80.24
Solyc02g065400.2.1	Tomato	plastid	79.22	79.94
PGSC0003DMT400026009	Potato	cytosol, extracellular, plastid	79.22	78.98
Solyc02g090030.2.1	Tomato	plastid	79.22	78.98
Zm00001d036535_P001	Maize	plastid	76.2	76.9
Os01t0501800-01	Rice	extracellular, plastid	76.51	76.28
HORVU2Hr1G057700.2	Barley	plastid	75.3	76.22
TraesCS2B01G270300.2	Wheat	plastid	75.3	76.22
TraesCS2D01G248400.2	Wheat	plastid	75.3	76.22
KXG20702	Sorghum	plastid	76.2	76.2
TraesCS2A01G247300.3	Wheat	plastid	75.3	75.3
Bra017790.1-P	Field mustard	plastid	72.29	75.24
Zm00001d014564_P001	Maize	plastid	76.81	68.36
GSMUA_AchrUn_...	Banana	plastid	22.59	64.1
Solyc07g032640.1.1	Tomato	plastid	24.1	62.99
Solyc07g032610.1.1	Tomato	cytosol	14.16	61.04
Solyc07g032620.1.1	Tomato	cytosol, nucleus, plastid	15.96	47.32

Protein Annotations

MapMan:1.1.1.2.2.1	Gene3D:2.40.160.30	Gene3D:3.30.2050.10	EnsemblPlantsGene:Bra037164	EnsemblPlants:Bra037164.1	EnsemblPlants:Bra037164.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009523	GO:GO:0009579
GO:GO:0009654	GO:GO:0009987	GO:GO:0010207	GO:GO:0010242	GO:GO:0015979	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0019898	GO:GO:0042549	GO:GO:0055114	UniProt:M4F7V3
InterPro:OMP/PagP_b-brl	PFAM:PF01716	InterPro:PSII_MSP	PANTHER:PTHR34058	PANTHER:PTHR34058:SF6	SUPFAM:SSF56925
UniParc:UPI0002541CA2	:	:	:	:	:

Description

AT5G66570 (E=1e-184) PSBO-1, OEE1, OEE33, OE33, PSBO1, MSP-1 | PSBO1 (PS II OXYGEN-EVOLVING COMPLEX 1); oxygen evolving/ poly(U) binding

Coordinates

chrA09:+:4180897..4182606

Molecular Weight (calculated)

35148.1 Da

IEP (calculated)

5.289

GRAVY (calculated)

-0.349

Length

332 amino acids

Sequence
(BLAST)

001: MAASLQSATT FLQSAKISTA PSRGSAHLRS TQTVGKSFGL ETSSARLTCS FQSDFKDFAG KCSDAVKIAG FALATSALVV SGASAEGAPK RLTYDEIQSK
101: TYMEVKGTGT ANQCPTIDGG SETFSFKPGK YAGKKFCFEP TSFTVKAESV SKNAPPDFQN TKLMTRLTYT LDEIEGPFEV SSDGSVNFKE EDGIDYAAVT
201: VQLPGGERVP FLFTVKQLDA SGKPDSFTGK FLVPSYRGSS FLDPKGRGGS TGYDNAVALP AGGRGDEEEL SKENVKNTAA SVGEITLKVT KSKPETGEVI
301: GVFESLQPSD TDLGAKVPKD VKIQGVWYGQ LE

Best Arabidopsis Sequence Match ( AT5G66570.1 )
(BLAST)

001: MAASLQSTAT FLQSAKIATA PSRGSSHLRS TQAVGKSFGL ETSSARLTCS FQSDFKDFTG KCSDAVKIAG FALATSALVV SGASAEGAPK RLTYDEIQSK
101: TYMEVKGTGT ANQCPTIDGG SETFSFKPGK YAGKKFCFEP TSFTVKADSV SKNAPPEFQN TKLMTRLTYT LDEIEGPFEV ASDGSVNFKE EDGIDYAAVT
201: VQLPGGERVP FLFTVKQLDA SGKPDSFTGK FLVPSYRGSS FLDPKGRGGS TGYDNAVALP AGGRGDEEEL VKENVKNTAA SVGEITLKVT KSKPETGEVI
301: GVFESLQPSD TDLGAKVPKD VKIQGVWYGQ LE

Arabidopsis Description

PSBO1Oxygen-evolving enhancer protein 1-1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P23321]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.