Factsheet for PGSC0003DMT400007189

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

cytosol: 22313117
extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g065400.2.1	Tomato	plastid	99.09	99.09
PGSC0003DMT400026009	Potato	cytosol, extracellular, plastid	91.19	90.09
VIT_00s0207g00210.t01	Wine grape	plastid	85.41	84.64
KRH28553	Soybean	nucleus, plastid	84.5	84.5
KRH08348	Soybean	nucleus, plastid	84.19	83.69
KRH76911	Soybean	nucleus, plastid	83.59	83.59
VIT_18s0001g11710.t01	Wine grape	plastid	83.89	83.38
KRH69993	Soybean	mitochondrion, nucleus	82.37	83.13
Os01t0501800-01	Rice	extracellular, plastid	83.89	82.88
TraesCS2D01G248400.2	Wheat	plastid	81.76	82.01
TraesCS2B01G270300.2	Wheat	plastid	81.76	82.01
HORVU2Hr1G057700.2	Barley	plastid	81.46	81.71
Zm00001d036535_P001	Maize	plastid	81.46	81.46
TraesCS2A01G247300.3	Wheat	plastid	81.76	81.02
CDY55088	Canola	plastid	80.55	79.82
Bra031813.1-P	Field mustard	plastid	80.55	79.82
KXG20702	Sorghum	plastid	80.55	79.82
Bra012083.1-P	Field mustard	plastid	80.24	79.52
Bra037164.1-P	Field mustard	plastid	80.24	79.52
CDX81388	Canola	plastid	80.24	79.52
CDY18611	Canola	plastid	80.24	79.52
CDY30764	Canola	plastid	80.24	79.52
CDY45242	Canola	plastid	80.24	79.52
CDY50981	Canola	plastid	79.94	79.22
Bra038863.1-P	Field mustard	plastid	79.64	78.68
Zm00001d014564_P001	Maize	plastid	81.16	71.58
CDY26519	Canola	plastid	78.12	68.9
CDY33308	Canola	plastid	78.42	67.72
GSMUA_AchrUn_...	Banana	plastid	23.71	66.67
CDX73783	Canola	cytosol	24.01	58.96

Protein Annotations

MapMan:1.1.1.2.2.1	EntrezGene:102577458	Gene3D:2.40.160.30	Gene3D:3.30.2050.10	ProteinID:ADR71223	ProteinID:ADR71223.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009523	GO:GO:0009579
GO:GO:0009654	GO:GO:0009987	GO:GO:0010207	GO:GO:0010242	GO:GO:0015979	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0019898	GO:GO:0042549	GO:GO:0055114	EMBL:HQ534294
UniProt:M0ZSM1	InterPro:OMP/PagP_b-brl	PFAM:PF01716	EnsemblPlantsGene:PGSC0003DMG400002782	PGSC:PGSC0003DMG400002782	EnsemblPlants:PGSC0003DMT400007189
InterPro:PSII_MSP	PANTHER:PTHR34058	PANTHER:PTHR34058:SF6	SUPFAM:SSF56925	UniParc:UPI00029612FB	RefSeq:XP_006344816.1

Description

Oxygen-evolving enhancer protein 1, chloroplastic [Source:PGSC_GENE;Acc:PGSC0003DMG400002782]

Coordinates

chr2:+:24407426..24409769

Molecular Weight (calculated)

34963.5 Da

IEP (calculated)

5.611

GRAVY (calculated)

-0.282

Length

329 amino acids

Sequence
(BLAST)

001: MAASLQAAAT LMQPTKVGAR NNLQLRSVQS VSKAFGVEQG SARLTCSLQT EIKELAQKCT DAAKIAGFAL ATSALVVSGA NAEGVPKRLT YDEIQSKTYM
101: EVKGTGTANQ CPTIEGGVGS FAFKPGKYTA KKFCLEPTSF TVKAEGVSKN SAPDFQKTKL MTRLTYTLDE IEGPFEVSPD GTVKFEEKDG IDYAAVTVQL
201: PGGERVPFLF TIKQLVASGK PESFSGEFLV PSYRGSSFLD PKGRGGSTGY DNAVALPAGG RGDEEELQKE NVKNTASLTG KITLSVTQSK PETGEVIGVF
301: ESIQPSDTDL GAKVPKDVKI QGIWYAQLE

Best Arabidopsis Sequence Match ( AT3G50820.1 )
(BLAST)

001: MATSLQAAAT FLQPAKIAAS PSRNVHLRSN QTVGKSFGLD SSQARLTCSL HSDLKDFAGK CSDAAKIAGF ALATSALVVS GAGAEGAPKR LTYDEIQSKT
101: YMEVKGTGTA NQCPTIDGGS ETFSFKAGKY TGKKFCFEPT SFTVKADSVS KNAPPDFQNT KLMTRLTYTL DEIEGPFEVG SDGSVKFKEE DGIDYAAVTV
201: QLPGGERVPF LFTVKQLEAS GKPESFSGKF LVPSYRGSSF LDPKGRGGST GYDNAVALPA GGRGDEEELS KENVKNTAAS VGEITLKITK SKPETGEVIG
301: VFESLQPSDT DLGAKVPKDV KIQGVWYGQI E

Arabidopsis Description

PSBO2Oxygen-evolving enhancer protein 1-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S841]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.