CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER95095
EES01731
EES19649
KXG26133
OQU78269

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G50820.1	OQU78269	AT5G42980.1	15352244
AT5G66570.1	EER95095	AT3G12580.1	16619024
AT5G66570.1	EES01731	AT3G12580.1	16619024
AT5G66570.1	EES19649	AT3G12580.1	16619024
AT5G66570.1	KXG26133	AT3G12580.1	16619024
AT5G66570.1	OQU78269	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036535_P001	Maize	plastid	95.48	96.35
TraesCS2D01G248400.2	Wheat	plastid	89.46	90.55
TraesCS2B01G270300.2	Wheat	plastid	89.46	90.55
Os01t0501800-01	Rice	extracellular, plastid	90.66	90.39
HORVU2Hr1G057700.2	Barley	plastid	89.16	90.24
TraesCS2A01G247300.3	Wheat	plastid	89.46	89.46
Zm00001d014564_P001	Maize	plastid	95.18	84.72
VIT_00s0207g00210.t01	Wine grape	plastid	80.72	80.72
PGSC0003DMT400007189	Potato	cytosol, extracellular, plastid	79.82	80.55
Solyc02g065400.2.1	Tomato	plastid	79.52	80.24
Solyc02g090030.2.1	Tomato	plastid	79.52	79.28
PGSC0003DMT400026009	Potato	cytosol, extracellular, plastid	79.52	79.28
KRH28553	Soybean	nucleus, plastid	78.31	79.03
KRH76911	Soybean	nucleus, plastid	78.31	79.03
KRH08348	Soybean	nucleus, plastid	78.31	78.55
VIT_18s0001g11710.t01	Wine grape	plastid	78.31	78.55
KRH69993	Soybean	mitochondrion, nucleus	77.11	78.53
AT3G50820.1	Thale cress	plastid	77.11	77.34
CDY45242	Canola	plastid	76.81	76.81
Bra012083.1-P	Field mustard	plastid	76.81	76.81
CDY30764	Canola	plastid	76.51	76.51
Bra037164.1-P	Field mustard	plastid	76.2	76.2
CDY18611	Canola	plastid	76.2	76.2
CDX81388	Canola	plastid	76.2	76.2
CDY55088	Canola	plastid	75.9	75.9
CDY50981	Canola	plastid	75.9	75.9
Bra031813.1-P	Field mustard	plastid	75.9	75.9
AT5G66570.1	Thale cress	plastid	75.9	75.9
Bra038863.1-P	Field mustard	plastid	75.3	75.08
CDX72613	Canola	plastid	71.69	74.61
CDY42709	Canola	plastid	70.48	73.35
Bra017790.1-P	Field mustard	plastid	69.88	72.73
GSMUA_AchrUn_...	Banana	plastid	23.19	65.81
CDY26519	Canola	plastid	73.8	65.68
CDY33308	Canola	plastid	74.1	64.57
Solyc07g032640.1.1	Tomato	plastid	24.7	64.57
AT4G37230.1	Thale cress	cytosol, nucleus, plastid	27.11	62.94
Solyc07g032610.1.1	Tomato	cytosol	14.16	61.04
CDX73783	Canola	cytosol	23.19	57.46
Solyc07g032620.1.1	Tomato	cytosol, nucleus, plastid	16.27	48.21

Protein Annotations

MapMan:1.1.1.2.2.1	Gene3D:2.40.160.30	Gene3D:3.30.2050.10	UniProt:A0A194YL80	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009523	GO:GO:0009579	GO:GO:0009654	GO:GO:0009987
GO:GO:0010207	GO:GO:0010242	GO:GO:0015979	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0019898	GO:GO:0042549	GO:GO:0055114	EnsemblPlants:KXG20702	ProteinID:KXG20702	ProteinID:KXG20702.1
InterPro:OMP/PagP_b-brl	PFAM:PF01716	InterPro:PSII_MSP	PANTHER:PTHR34058	PANTHER:PTHR34058:SF6	EnsemblPlantsGene:SORBI_3010G241000
SUPFAM:SSF56925	UniParc:UPI0001C805F4	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:58268236..58269360

Molecular Weight (calculated)

34829.4 Da

IEP (calculated)

5.941

GRAVY (calculated)

-0.192

Length

332 amino acids

Sequence
(BLAST)

001: MAASLQAAAT LMQPAKIGGR AHSASLPSRP SSHLARAFGV DAGAARITCS LQSDIRDVAS KCVDAAKLAG FALATSALLV SGASAEGTPR RLTYDQIQSL
101: TYMEVKGTGT ANQCPTIDGG VEAFPFKAGK YQMKKLCLEP TSFTVKAEGI AKNAPPEFQK TKLMTRLTYT LDEIEGPLEV GSDGTLKFEE KDGIDYAAVT
201: VQLPGGERVP FLFTVKQLVA TGKPESFGGP FLVPSYRGSS FLDPKGRGGS TGYDNAVALP AGGRGDEEEL LKENIKNAAA STGNITLSVT KSNPETGEVI
301: GVFESVQPSD TDLGAKAPKD VKIQGIWYAQ LE

Best Arabidopsis Sequence Match ( AT3G50820.1 )
(BLAST)

001: MATSLQAAAT FLQPAKIAAS PSRNVHLRSN QTVGKSFGLD SSQARLTCSL HSDLKDFAGK CSDAAKIAGF ALATSALVVS GAGAEGAPKR LTYDEIQSKT
101: YMEVKGTGTA NQCPTIDGGS ETFSFKAGKY TGKKFCFEPT SFTVKADSVS KNAPPDFQNT KLMTRLTYTL DEIEGPFEVG SDGSVKFKEE DGIDYAAVTV
201: QLPGGERVPF LFTVKQLEAS GKPESFSGKF LVPSYRGSSF LDPKGRGGST GYDNAVALPA GGRGDEEELS KENVKNTAAS VGEITLKITK SKPETGEVIG
301: VFESLQPSDT DLGAKVPKDV KIQGVWYGQI E

Arabidopsis Description

PSBO2Oxygen-evolving enhancer protein 1-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S841]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.