Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g032620.1.1 | Tomato | cytosol, nucleus, plastid | 80.52 | 55.36 |
| Solyc07g032640.1.1 | Tomato | plastid | 68.83 | 41.73 |
| GSMUA_AchrUn_... | Banana | plastid | 38.96 | 25.64 |
| Solyc02g090030.2.1 | Tomato | plastid | 70.13 | 16.22 |
| KRH69993 | Soybean | mitochondrion, nucleus | 67.53 | 15.95 |
| KRH08348 | Soybean | nucleus, plastid | 67.53 | 15.71 |
| VIT_18s0001g11710.t01 | Wine grape | plastid | 67.53 | 15.71 |
| VIT_00s0207g00210.t01 | Wine grape | plastid | 67.53 | 15.66 |
| TraesCS2B01G270300.2 | Wheat | plastid | 66.23 | 15.55 |
| TraesCS2D01G248400.2 | Wheat | plastid | 66.23 | 15.55 |
| HORVU2Hr1G057700.2 | Barley | plastid | 66.23 | 15.55 |
| Solyc02g065400.2.1 | Tomato | plastid | 66.23 | 15.5 |
| KRH28553 | Soybean | nucleus, plastid | 66.23 | 15.5 |
| TraesCS2A01G247300.3 | Wheat | plastid | 66.23 | 15.36 |
| Os01t0501800-01 | Rice | extracellular, plastid | 66.23 | 15.32 |
| KRH76911 | Soybean | nucleus, plastid | 64.94 | 15.2 |
| Zm00001d036535_P001 | Maize | plastid | 63.64 | 14.89 |
| CDY55088 | Canola | plastid | 61.04 | 14.16 |
| CDY50981 | Canola | plastid | 61.04 | 14.16 |
| CDY45242 | Canola | plastid | 61.04 | 14.16 |
| KXG20702 | Sorghum | plastid | 61.04 | 14.16 |
| CDY30764 | Canola | plastid | 61.04 | 14.16 |
| CDY18611 | Canola | plastid | 61.04 | 14.16 |
| CDX81388 | Canola | plastid | 61.04 | 14.16 |
| Bra037164.1-P | Field mustard | plastid | 61.04 | 14.16 |
| Bra031813.1-P | Field mustard | plastid | 61.04 | 14.16 |
| Bra012083.1-P | Field mustard | plastid | 61.04 | 14.16 |
| Bra038863.1-P | Field mustard | plastid | 61.04 | 14.11 |
| Zm00001d014564_P001 | Maize | plastid | 63.64 | 13.14 |
| CDY26519 | Canola | plastid | 61.04 | 12.6 |
| CDY33308 | Canola | plastid | 61.04 | 12.34 |
| CDX73783 | Canola | cytosol | 0.0 | 0.0 |
| AT4G37230.1 | Thale cress | cytosol, nucleus, plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.40.160.30 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009523 | GO:GO:0009579 | GO:GO:0009654 | GO:GO:0009987 | GO:GO:0010207 | GO:GO:0010242 |
| GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0019898 | GO:GO:0042549 |
| GO:GO:0055114 | UniProt:K4CDK1 | InterPro:OMP/PagP_b-brl | PFAM:PF01716 | InterPro:PSII_MSP | PANTHER:PTHR34058 |
| PANTHER:PTHR34058:SF2 | SUPFAM:SSF56925 | EnsemblPlantsGene:Solyc07g032610.1 | EnsemblPlants:Solyc07g032610.1.1 | UniParc:UPI000276B220 | : |
Description
No Description!
Coordinates
chr7:-:40616723..40616956
Molecular Weight (calculated)
8598.2 Da
IEP (calculated)
8.840
GRAVY (calculated)
-0.622
Length
77 amino acids
Sequence
(BLAST)
(BLAST)
1: MQGANAEGSP KCLTFDKIQT NTCMEVKRTG TANQCPTIDG GVDSFAFKLG KYNAKKFYLE TTSFTVKERV PKYQAYE
001: MATSLQAAAT FLQPAKIAAS PSRNVHLRSN QTVGKSFGLD SSQARLTCSL HSDLKDFAGK CSDAAKIAGF ALATSALVVS GAGAEGAPKR LTYDEIQSKT
101: YMEVKGTGTA NQCPTIDGGS ETFSFKAGKY TGKKFCFEPT SFTVKADSVS KNAPPDFQNT KLMTRLTYTL DEIEGPFEVG SDGSVKFKEE DGIDYAAVTV
201: QLPGGERVPF LFTVKQLEAS GKPESFSGKF LVPSYRGSSF LDPKGRGGST GYDNAVALPA GGRGDEEELS KENVKNTAAS VGEITLKITK SKPETGEVIG
301: VFESLQPSDT DLGAKVPKDV KIQGVWYGQI E
101: YMEVKGTGTA NQCPTIDGGS ETFSFKAGKY TGKKFCFEPT SFTVKADSVS KNAPPDFQNT KLMTRLTYTL DEIEGPFEVG SDGSVKFKEE DGIDYAAVTV
201: QLPGGERVPF LFTVKQLEAS GKPESFSGKF LVPSYRGSSF LDPKGRGGST GYDNAVALPA GGRGDEEELS KENVKNTAAS VGEITLKITK SKPETGEVIG
301: VFESLQPSDT DLGAKVPKDV KIQGVWYGQI E
Arabidopsis Description
PSBO2Oxygen-evolving enhancer protein 1-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S841]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.