Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 11
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
20363867
extracellular: 20496099 plastid: 22908117 plastid: 25431925 plastid: 26371478 plastid: 28183294 nucleus: 28394025 extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
22908117
doi
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID:
20363867
doi
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID:
20496099
doi
Institute for Plant Diseases and Plant Protection, Faculty of Natural Sciences, Leibniz Universität Hannover, Herrenhäuser Str.2, 30419 Hannover, Germany. dahal@ipp.uni-hannover.de
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID:
26371478
doi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
msms PMID:
28183294
doi
Center of Genetics Engineering (CEINGE) Biotecnologie Avanzate S.c. a R.l, via Pansini, 80100, Napoli, Italy., Department of Molecular Medicine and Medical Biotechnology, University of Naples Federico II, via Pansini, 80100, Napoli, Italy., Institute for the Animal Production System in the Mediterranean Environment, National Research Council of Italy (CNR-ISPAAM), via Argine 1085, 80147, Napoli, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy., Institute of Biosciences and BioResources, National Research Council of Italy (CNR-IBBR), via Università 133, 80055, Portici, NA, Italy. nscotti@unina.it.
msms PMID:
25431925
doi
Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. abinayamanivannan@gmail.com., Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. brjeong@gmail.com., Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. iuyiuy09@naver.com., Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. prabhakaran.s.bioinfo@gmail.com., Division of Applied Life Science (BK21 Plus), Gyeongsang National University, Jinju 660-701, Korea. sobiyakhan126@gmail.com.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400007189 | Potato | cytosol, extracellular, plastid | 99.09 | 99.09 |
Solyc02g090030.2.1 | Tomato | plastid | 90.58 | 89.49 |
VIT_00s0207g00210.t01 | Wine grape | plastid | 85.41 | 84.64 |
KRH28553 | Soybean | nucleus, plastid | 84.19 | 84.19 |
KRH08348 | Soybean | nucleus, plastid | 83.89 | 83.38 |
KRH76911 | Soybean | nucleus, plastid | 83.28 | 83.28 |
KRH69993 | Soybean | mitochondrion, nucleus | 82.37 | 83.13 |
VIT_18s0001g11710.t01 | Wine grape | plastid | 83.59 | 83.08 |
Os01t0501800-01 | Rice | extracellular, plastid | 83.59 | 82.58 |
TraesCS2D01G248400.2 | Wheat | plastid | 81.76 | 82.01 |
TraesCS2B01G270300.2 | Wheat | plastid | 81.76 | 82.01 |
HORVU2Hr1G057700.2 | Barley | plastid | 81.46 | 81.71 |
Zm00001d036535_P001 | Maize | plastid | 81.16 | 81.16 |
TraesCS2A01G247300.3 | Wheat | plastid | 81.76 | 81.02 |
CDY55088 | Canola | plastid | 80.24 | 79.52 |
Bra031813.1-P | Field mustard | plastid | 80.24 | 79.52 |
KXG20702 | Sorghum | plastid | 80.24 | 79.52 |
Bra012083.1-P | Field mustard | plastid | 79.94 | 79.22 |
Bra037164.1-P | Field mustard | plastid | 79.94 | 79.22 |
CDX81388 | Canola | plastid | 79.94 | 79.22 |
CDY18611 | Canola | plastid | 79.94 | 79.22 |
CDY45242 | Canola | plastid | 79.94 | 79.22 |
CDY30764 | Canola | plastid | 79.64 | 78.92 |
CDY50981 | Canola | plastid | 79.64 | 78.92 |
Bra038863.1-P | Field mustard | plastid | 79.33 | 78.38 |
Solyc07g032640.1.1 | Tomato | plastid | 28.27 | 73.23 |
Zm00001d014564_P001 | Maize | plastid | 80.85 | 71.31 |
CDY26519 | Canola | plastid | 77.81 | 68.63 |
CDY33308 | Canola | plastid | 78.12 | 67.45 |
Solyc07g032610.1.1 | Tomato | cytosol | 15.5 | 66.23 |
GSMUA_AchrUn_... | Banana | plastid | 23.4 | 65.81 |
CDX73783 | Canola | cytosol | 24.01 | 58.96 |
Solyc07g032620.1.1 | Tomato | cytosol, nucleus, plastid | 19.45 | 57.14 |
Protein Annotations
MapMan:1.1.1.2.2.1 | Gene3D:2.40.160.30 | Gene3D:3.30.2050.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009523 | GO:GO:0009535 | GO:GO:0009536 |
GO:GO:0009579 | GO:GO:0009654 | GO:GO:0009987 | GO:GO:0010207 | GO:GO:0010242 | GO:GO:0015979 |
GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0019898 | GO:GO:0042549 | GO:GO:0055114 |
InterPro:OMP/PagP_b-brl | UniProt:P23322 | PFAM:PF01716 | InterPro:PSII_MSP | PANTHER:PTHR34058 | PANTHER:PTHR34058:SF6 |
SUPFAM:SSF56925 | EnsemblPlantsGene:Solyc02g065400.2 | EnsemblPlants:Solyc02g065400.2.1 | UniParc:UPI000013271F | EMBL:X52427 | EMBL:Z11999 |
Description
PSBOOxygen-evolving enhancer protein 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P23322]
Coordinates
chr2:+:36573934..36576914
Molecular Weight (calculated)
34949.5 Da
IEP (calculated)
5.611
GRAVY (calculated)
-0.289
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASLQAAAT LMQPTKVGVR NNLQLRSAQS VSKAFGVEQG SGRLTCSLQT EIKELAQKCT DAAKIAGFAL ATSALVVSGA NAEGVPKRLT YDEIQSKTYM
101: EVKGTGTANQ CPTIEGGVGS FAFKPGKYTA KKFCLEPTSF TVKAEGVSKN SAPDFQKTKL MTRLTYTLDE IEGPFEVSPD GTVKFEEKDG IDYAAVTVQL
201: PGGERVPFLF TIKQLVASGK PESFSGEFLV PSYRGSSFLD PKGRGGSTGY DNAVALPAGG RGDEEELQKE NVKNTASLTG KITLSVTQSK PETGEVIGVF
301: ESIQPSDTDL GAKVPKDVKI QGIWYAQLE
101: EVKGTGTANQ CPTIEGGVGS FAFKPGKYTA KKFCLEPTSF TVKAEGVSKN SAPDFQKTKL MTRLTYTLDE IEGPFEVSPD GTVKFEEKDG IDYAAVTVQL
201: PGGERVPFLF TIKQLVASGK PESFSGEFLV PSYRGSSFLD PKGRGGSTGY DNAVALPAGG RGDEEELQKE NVKNTASLTG KITLSVTQSK PETGEVIGVF
301: ESIQPSDTDL GAKVPKDVKI QGIWYAQLE
001: MATSLQAAAT FLQPAKIAAS PSRNVHLRSN QTVGKSFGLD SSQARLTCSL HSDLKDFAGK CSDAAKIAGF ALATSALVVS GAGAEGAPKR LTYDEIQSKT
101: YMEVKGTGTA NQCPTIDGGS ETFSFKAGKY TGKKFCFEPT SFTVKADSVS KNAPPDFQNT KLMTRLTYTL DEIEGPFEVG SDGSVKFKEE DGIDYAAVTV
201: QLPGGERVPF LFTVKQLEAS GKPESFSGKF LVPSYRGSSF LDPKGRGGST GYDNAVALPA GGRGDEEELS KENVKNTAAS VGEITLKITK SKPETGEVIG
301: VFESLQPSDT DLGAKVPKDV KIQGVWYGQI E
101: YMEVKGTGTA NQCPTIDGGS ETFSFKAGKY TGKKFCFEPT SFTVKADSVS KNAPPDFQNT KLMTRLTYTL DEIEGPFEVG SDGSVKFKEE DGIDYAAVTV
201: QLPGGERVPF LFTVKQLEAS GKPESFSGKF LVPSYRGSSF LDPKGRGGST GYDNAVALPA GGRGDEEELS KENVKNTAAS VGEITLKITK SKPETGEVIG
301: VFESLQPSDT DLGAKVPKDV KIQGVWYGQI E
Arabidopsis Description
PSBO2Oxygen-evolving enhancer protein 1-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S841]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.