Factsheet for PGSC0003DMT400026009

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

cytosol: 22313117
extracellular: 22313117

msms PMID: 22313117 doi

S Lim, K Chisholm, RH Coffin, RD Peters, KI Al-Mughrabi, G Wang-Pruski, DM Pinto

Department of Plant and Animal Sciences, Nova Scotia Agricultural College, Truro, Nova Scotia, Canada.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g090030.2.1	Tomato	plastid	97.9	97.9
PGSC0003DMT400007189	Potato	cytosol, extracellular, plastid	90.09	91.19
VIT_00s0207g00210.t01	Wine grape	plastid	85.29	85.54
KRH28553	Soybean	nucleus, plastid	84.08	85.11
KRH76911	Soybean	nucleus, plastid	83.78	84.8
KRH69993	Soybean	mitochondrion, nucleus	82.88	84.66
KRH08348	Soybean	nucleus, plastid	82.88	83.38
VIT_18s0001g11710.t01	Wine grape	plastid	81.98	82.48
TraesCS2D01G248400.2	Wheat	plastid	80.78	82.01
TraesCS2B01G270300.2	Wheat	plastid	80.78	82.01
HORVU2Hr1G057700.2	Barley	plastid	80.78	82.01
Os01t0501800-01	Rice	extracellular, plastid	81.68	81.68
Zm00001d036535_P001	Maize	plastid	80.18	81.16
TraesCS2A01G247300.3	Wheat	plastid	80.78	81.02
KXG20702	Sorghum	plastid	79.28	79.52
Bra037164.1-P	Field mustard	plastid	78.98	79.22
CDX81388	Canola	plastid	78.98	79.22
CDY18611	Canola	plastid	78.98	79.22
Bra012083.1-P	Field mustard	plastid	78.68	78.92
Bra031813.1-P	Field mustard	plastid	78.68	78.92
CDY45242	Canola	plastid	78.68	78.92
CDY50981	Canola	plastid	78.68	78.92
CDY55088	Canola	plastid	78.68	78.92
Bra038863.1-P	Field mustard	plastid	78.68	78.68
CDY30764	Canola	plastid	78.38	78.61
Zm00001d014564_P001	Maize	plastid	80.48	71.85
GSMUA_AchrUn_...	Banana	plastid	24.62	70.09
CDY26519	Canola	plastid	77.48	69.17
CDY33308	Canola	plastid	77.78	67.98
CDX73783	Canola	cytosol	23.42	58.21

Protein Annotations

MapMan:1.1.1.2.2.1	EntrezGene:102577592	Gene3D:2.40.160.30	Gene3D:3.30.2050.10	ProteinID:ACS34663	ProteinID:ACS34663.1
ProteinID:CAA35601	ProteinID:CAA35601.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009507	GO:GO:0009523	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579
GO:GO:0009654	GO:GO:0009987	GO:GO:0010207	GO:GO:0010242	GO:GO:0015979	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0019898	GO:GO:0042549	GO:GO:0055114	EMBL:GQ141514
UniProt:M1AMG7	InterPro:OMP/PagP_b-brl	PFAM:PF01716	EnsemblPlantsGene:PGSC0003DMG400010035	PGSC:PGSC0003DMG400010035	EnsemblPlants:PGSC0003DMT400026009
InterPro:PSII_MSP	PANTHER:PTHR34058	PANTHER:PTHR34058:SF6	SUPFAM:SSF56925	UniParc:UPI000296A904	EMBL:X17578
RefSeq:XP_006338257.1	:	:	:	:	:

Description

Oxygen-evolving enhancer protein 1, chloroplastic [Source:PGSC_GENE;Acc:PGSC0003DMG400010035]

Coordinates

chr2:+:44695145..44696700

Molecular Weight (calculated)

35338.7 Da

IEP (calculated)

5.586

GRAVY (calculated)

-0.310

Length

333 amino acids

Sequence
(BLAST)

001: MAASLQAAAT LMQPTKVGGV SARNNLQLRS SQSVSKAFGL EPSASRLSCS LQTDLKDFAQ KCTDAAKIAG FALATSALVV SGANAEGVPK RLTFDEIQSK
101: TYMEVKGTGT ANQCPTIDGG VDSFAFKSGK YNAKKFCLEP TSFTVKAEGV SKNSAPDFQK TKLMTRLTYT LDEIEGPFEV SPDGTVKFEE KDGIDYAAVT
201: VQLPGGERVP FLFTIKQLVA SGKPESFSGD FLVPSYRGSS FLDPKGRGGS TGYDNAVALP AGGRGDEEEL QKENVKNTAS LTGKITFTVT KSNPQTGEVI
301: GVFESIQPSD TDLGAKTPKD VKIQGIWYAQ LES

Best Arabidopsis Sequence Match ( AT3G50820.1 )
(BLAST)

001: MATSLQAAAT FLQPAKIAAS PSRNVHLRSN QTVGKSFGLD SSQARLTCSL HSDLKDFAGK CSDAAKIAGF ALATSALVVS GAGAEGAPKR LTYDEIQSKT
101: YMEVKGTGTA NQCPTIDGGS ETFSFKAGKY TGKKFCFEPT SFTVKADSVS KNAPPDFQNT KLMTRLTYTL DEIEGPFEVG SDGSVKFKEE DGIDYAAVTV
201: QLPGGERVPF LFTVKQLEAS GKPESFSGKF LVPSYRGSSF LDPKGRGGST GYDNAVALPA GGRGDEEELS KENVKNTAAS VGEITLKITK SKPETGEVIG
301: VFESLQPSDT DLGAKVPKDV KIQGVWYGQI E

Arabidopsis Description

PSBO2Oxygen-evolving enhancer protein 1-2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S841]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.