Factsheet for Bra038094.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
vacuole 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G26000.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22731	Canola	cytosol	40.47	98.86
Bra020523.1-P	Field mustard	cytosol	46.74	65.69
Bra023838.1-P	Field mustard	endoplasmic reticulum, vacuole	76.74	64.08
Bra020549.1-P	Field mustard	cytosol	38.84	63.74
Bra039705.1-P	Field mustard	vacuole	80.47	63.6
Bra032343.1-P	Field mustard	cytosol	49.53	63.58
Bra036914.1-P	Field mustard	cytosol	42.79	56.27
Bra039823.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	67.21	52.36
Bra039825.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	67.21	52.36
AT5G26000.1	Thale cress	endoplasmic reticulum, vacuole	65.81	52.31
Bra016676.1-P	Field mustard	endoplasmic reticulum, vacuole	64.19	51.3
Bra004012.1-P	Field mustard	endoplasmic reticulum	62.33	49.81
Bra020551.1-P	Field mustard	cytosol	11.86	39.84
Bra014287.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	44.65	38.1
Bra030473.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	45.12	37.67

Protein Annotations

EnsemblPlants:Bra038094.1	EnsemblPlants:Bra038094.1-P	EnsemblPlantsGene:Bra038094	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_1
InterPro:Glyco_hydro_1_AS	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR10353	PANTHER:PTHR10353:SF44	PFAM:PF00232	PRINTS:PR00131
ScanProsite:PS00572	SUPFAM:SSF51445	UniParc:UPI0002545A0B	UniProt:M4FAI0	MapMan:9.5.2.1	:

Description

AT5G26000 (E=5e-160) TGG1, BGLU38 | TGG1 (THIOGLUCOSIDE GLUCOHYDROLASE 1); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase

Coordinates

chrA08:+:6577671..6579961

Molecular Weight (calculated)

49454.6 Da

IEP (calculated)

7.844

GRAVY (calculated)

-0.459

Length

430 amino acids

Sequence
(BLAST)

001: MLLATDFPLR GGKRSRGVNQ EGVNYYRGLI NRLVEKGITP FVTLFHWDLP QALQDEYEGF LDPQIINDFK DYADLCFQEF GANVTNWITI NQLYTVPTRG
101: YGFGSDAPGR CSRALDPTCY AGNSSTEPYI VAHHQLLAHA TVVDLYRKNY KHQGGKIGPV MITRWFLPYD NNDPESKAAT ERMKEFFLGW FMGPLTNGAY
201: PQIMIDTVGK RLPSFTPEES KLVKGSYDFL GLNYYVTQYV QPSPNHVDWA NHTAMMDAGV TLTYRDINGH AIGPLFTEDK VDAAKNTYYY PEGISYVMDY
301: FKTKYYNPLI YVTENGFSTP GDEPREAAKL DCKRIDYLCS HLYFLSKVIK ENHVNVKGYF AWSLGDNYEF CKGFTVRFGL SYIDWNNITD RDLKQSGKWY
401: KKFIITKDLP KKDFLRSSLT FEKKKKFADA

Best Arabidopsis Sequence Match ( AT5G25980.1 )
(BLAST)

001: MQHNTYIYIL TMKLLGFALA ILLVVATCKP EEEITCEENV PFTCSQTDRF NKQDFESDFI FGVASSAYQI EGGRGRGLNV WDGFTHRYPE KGGADLGNGD
101: TTCDSYRTWQ KDLDVMEELG VKGYRFSFAW SRILPKGKRS RGINEDGINY YSGLIDGLIA RNITPFVTLF HWDLPQSLQD EYEGFLDRTI IDDFKDYADL
201: CFERFGDRVK HWITINQLFT VPTRGYALGT DAPGRCSQWV DKRCYGGDSS TEPYIVAHNQ LLAHATVVDL YRTRYKYQGG KIGPVMITRW FLPYDDTLES
301: KQATWRAKEF FLGWFMEPLT KGKYPYIMRK LVGNRLPKFN STEARLLKGS YDFLGLNYYV TQYAHALDPS PPEKLTAMTD SLANLTSLDA NGQPPGPPFS
401: KGSYYHPRGM LNVMEHFKTK YGDPLIYVTE NGFSTSGGPI PFTEAFHDYN RIDYLCSHLC FLRKAIK

Arabidopsis Description

TGG2Myrosinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C2]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.