Factsheet for Bra020551.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52412	Canola	cytosol	47.66	68.54
Bra020523.1-P	Field mustard	cytosol	60.94	25.49
Bra038094.1-P	Field mustard	cytosol	39.84	11.86
Bra039823.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	50.78	11.78
Bra039825.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	50.78	11.78
Bra016676.1-P	Field mustard	endoplasmic reticulum, vacuole	46.09	10.97
Bra004012.1-P	Field mustard	endoplasmic reticulum	44.53	10.59
Bra039705.1-P	Field mustard	vacuole	40.62	9.56
Bra023838.1-P	Field mustard	endoplasmic reticulum, vacuole	36.72	9.13
AT5G25980.2	Thale cress	endoplasmic reticulum, vacuole	36.72	8.59
Bra014287.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	24.22	6.15
Bra030473.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	23.44	5.83
Bra020549.1-P	Field mustard	cytosol	3.91	1.91
Bra032343.1-P	Field mustard	cytosol	0.78	0.3
Bra036914.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Bra020551.1	EnsemblPlants:Bra020551.1-P	EnsemblPlantsGene:Bra020551	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_1
InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR10353	PANTHER:PTHR10353:SF44	PFAM:PF00232	PRINTS:PR00131	SEG:seg
SUPFAM:SSF51445	UniParc:UPI0002546C8A	UniProt:M4DVK7	MapMan:50.3.2	:	:

Description

AT5G26000 (E=2e-022) TGG1, BGLU38 | TGG1 (THIOGLUCOSIDE GLUCOHYDROLASE 1); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase

Coordinates

chrA02:-:24622967..24623962

Molecular Weight (calculated)

14952.7 Da

IEP (calculated)

10.667

GRAVY (calculated)

-0.759

Length

128 amino acids

Sequence
(BLAST)

001: MIVLVFREKG VNVRGYFAWA LGDNYEFCKG FTVRFGLSYV NWEDLDDRNL KESGKWYQRF INGTVKNAVK QDFLRSSLSS QSQKKRNLKE SGKWYQRFIN
101: GTVKNSAKQD FLRSSLSSQS QKKRLSDA

Best Arabidopsis Sequence Match ( AT5G26000.1 )
(BLAST)

001: MKLLMLAFVF LLALATCKGD EFVCEENEPF TCNQTKLFNS GNFEKGFIFG VASSAYQVEG GRGRGLNVWD SFTHRFPEKG GADLGNGDTT CDSYTLWQKD
101: IDVMDELNST GYRFSIAWSR LLPKGKRSRG VNPGAIKYYN GLIDGLVAKN MTPFVTLFHW DLPQTLQDEY NGFLNKTIVD DFKDYADLCF ELFGDRVKNW
201: ITINQLYTVP TRGYALGTDA PGRCSPKIDV RCPGGNSSTE PYIVAHNQLL AHAAAVDVYR TKYKDDQKGM IGPVMITRWF LPFDHSQESK DATERAKIFF
301: HGWFMGPLTE GKYPDIMREY VGDRLPEFSE TEAALVKGSY DFLGLNYYVT QYAQNNQTIV PSDVHTALMD SRTTLTSKNA TGHAPGPPFN AASYYYPKGI
401: YYVMDYFKTT YGDPLIYVTE NGFSTPGDED FEKATADYKR IDYLCSHLCF LSKVIKEKNV NVKGYFAWSL GDNYEFCNGF TVRFGLSYVD FANITGDRDL
501: KASGKWFQKF INVTDEDSTN QDLLRSSVSS KNRDRKSLAD A

Arabidopsis Description

TGG1TGG1 [Source:UniProtKB/TrEMBL;Acc:A0A178U7L7]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.