CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra020551.1-P	Field mustard	cytosol	68.54	47.66
CDY65716	Canola	cytosol	64.04	41.91
CDY24996	Canola	cytosol	71.91	36.36
CDY68654	Canola	cytosol	71.91	35.56
CDY46560	Canola	cytosol, vacuole	33.71	30.0
CDY22731	Canola	cytosol	57.3	28.98
CDY67044	Canola	cytosol	4.49	23.53
CDX87822	Canola	plasma membrane	29.21	20.63
CDY24995	Canola	cytosol, plastid, vacuole	71.91	18.99
CDY29604	Canola	mitochondrion, plastid, vacuole	33.71	17.86
CDY37226	Canola	extracellular	84.27	13.56
CDY05334	Canola	cytosol	73.03	12.33
CDY26308	Canola	cytosol	74.16	12.11
CDY67046	Canola	extracellular	70.79	11.54
CDY07361	Canola	endoplasmic reticulum	64.04	10.59
CDY09054	Canola	vacuole	58.43	10.57
CDY09042	Canola	vacuole	57.3	9.66
CDY52022	Canola	cytosol	57.3	9.6
CDY22724	Canola	cytosol	57.3	9.34
CDY39513	Canola	endoplasmic reticulum, vacuole	52.81	8.94
CDY71022	Canola	cytosol	52.81	8.79
CDY46331	Canola	endoplasmic reticulum, vacuole	52.81	8.67
AT5G25980.2	Thale cress	endoplasmic reticulum, vacuole	51.69	8.41
CDY22730	Canola	mitochondrion	13.48	2.65
CDX90772	Canola	mitochondrion	12.36	1.86
CDY72290	Canola	cytosol, mitochondrion, vacuole	0.0	0.0
CDY71771	Canola	cytosol, vacuole	0.0	0.0
CDY70871	Canola	mitochondrion, vacuole	0.0	0.0
CDY04261	Canola	vacuole	0.0	0.0
CDY29614	Canola	cytosol, peroxisome, vacuole	0.0	0.0
CDY24999	Canola	cytosol, mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:CDY52412	EnsemblPlantsGene:GSBRNA2T00006861001	Gene3D:3.20.20.80	GO:A0A078IR22	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_1
InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR10353	PANTHER:PTHR10353:SF44	PFAM:PF00232	PRINTS:PR00131	ProteinID:CDY52412
ProteinID:CDY52412.1	SUPFAM:SSF51445	UniParc:UPI0004EE0BEA	UniProt:A0A078IR22	MapMan:50.3.2	:

Description

BnaCnng22330DBnaCnng22330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IR22]

Coordinates

chrLK033084:+:3409..3932

Molecular Weight (calculated)

10235.0 Da

IEP (calculated)

9.991

GRAVY (calculated)

-0.774

Length

89 amino acids

Sequence
(BLAST)

1: MFSPQGHQGV NIKGYFAWAL GDNYEFCKGF TVRFGLSYVN WTDLNDRNLK KSGKWYQSFI NGTTKNPAKQ DFCPPNLSFQ NQKKKLSDA

Best Arabidopsis Sequence Match ( AT5G26000.1 )
(BLAST)

001: MKLLMLAFVF LLALATCKGD EFVCEENEPF TCNQTKLFNS GNFEKGFIFG VASSAYQVEG GRGRGLNVWD SFTHRFPEKG GADLGNGDTT CDSYTLWQKD
101: IDVMDELNST GYRFSIAWSR LLPKGKRSRG VNPGAIKYYN GLIDGLVAKN MTPFVTLFHW DLPQTLQDEY NGFLNKTIVD DFKDYADLCF ELFGDRVKNW
201: ITINQLYTVP TRGYALGTDA PGRCSPKIDV RCPGGNSSTE PYIVAHNQLL AHAAAVDVYR TKYKDDQKGM IGPVMITRWF LPFDHSQESK DATERAKIFF
301: HGWFMGPLTE GKYPDIMREY VGDRLPEFSE TEAALVKGSY DFLGLNYYVT QYAQNNQTIV PSDVHTALMD SRTTLTSKNA TGHAPGPPFN AASYYYPKGI
401: YYVMDYFKTT YGDPLIYVTE NGFSTPGDED FEKATADYKR IDYLCSHLCF LSKVIKEKNV NVKGYFAWSL GDNYEFCNGF TVRFGLSYVD FANITGDRDL
501: KASGKWFQKF INVTDEDSTN QDLLRSSVSS KNRDRKSLAD A

Arabidopsis Description

TGG1TGG1 [Source:UniProtKB/TrEMBL;Acc:A0A178U7L7]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.