Subcellular Localization
min:
: max
Winner_takes_all: cytosol, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 4
- vacuole 5
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87822 | Canola | plasma membrane | 73.0 | 57.94 |
| CDY29604 | Canola | mitochondrion, plastid, vacuole | 82.0 | 48.81 |
| CDY52412 | Canola | cytosol | 30.0 | 33.71 |
| CDY65716 | Canola | cytosol | 41.0 | 30.15 |
| CDY24996 | Canola | cytosol | 42.0 | 23.86 |
| CDY67044 | Canola | cytosol | 4.0 | 23.53 |
| CDY68654 | Canola | cytosol | 42.0 | 23.33 |
| CDY22731 | Canola | cytosol | 39.0 | 22.16 |
| Bra014287.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 85.0 | 16.87 |
| AT1G47600.1 | Thale cress | endoplasmic reticulum, vacuole | 76.0 | 14.87 |
| CDY24995 | Canola | cytosol, plastid, vacuole | 45.0 | 13.35 |
| CDY52022 | Canola | cytosol | 46.0 | 8.66 |
| CDY05334 | Canola | cytosol | 45.0 | 8.54 |
| CDY09054 | Canola | vacuole | 41.0 | 8.33 |
| CDY26308 | Canola | cytosol | 45.0 | 8.26 |
| CDY67046 | Canola | extracellular | 45.0 | 8.24 |
| CDY07361 | Canola | endoplasmic reticulum | 43.0 | 7.99 |
| CDY37226 | Canola | extracellular | 44.0 | 7.96 |
| CDY71022 | Canola | cytosol | 42.0 | 7.85 |
| CDY39513 | Canola | endoplasmic reticulum, vacuole | 41.0 | 7.79 |
| CDY09042 | Canola | vacuole | 40.0 | 7.58 |
| CDY46331 | Canola | endoplasmic reticulum, vacuole | 41.0 | 7.56 |
| CDY22724 | Canola | cytosol | 40.0 | 7.33 |
| CDY29614 | Canola | cytosol, peroxisome, vacuole | 3.0 | 3.23 |
| CDX90772 | Canola | mitochondrion | 16.0 | 2.7 |
| CDY22730 | Canola | mitochondrion | 8.0 | 1.77 |
| CDY24999 | Canola | cytosol, mitochondrion | 3.0 | 1.48 |
| CDY70871 | Canola | mitochondrion, vacuole | 3.0 | 1.32 |
| CDY71771 | Canola | cytosol, vacuole | 3.0 | 0.82 |
| CDY04261 | Canola | vacuole | 2.0 | 0.52 |
| CDY72290 | Canola | cytosol, mitochondrion, vacuole | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:A0A078I6P2 | UniProt:A0A078I6P2 | EnsemblPlants:CDY46560 | ProteinID:CDY46560 |
| ProteinID:CDY46560.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00085780001 | InterPro:Glyco_hydro_1 | InterPro:Glycoside_hydrolase_SF | PFAM:PF00232 |
| PRINTS:PR00131 | PANTHER:PTHR10353 | PANTHER:PTHR10353:SF44 | SUPFAM:SSF51445 | UniParc:UPI0004EEA2DC | : |
Description
BnaA08g01990DBnaA08g01990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6P2]
Coordinates
chrLK032675:+:131182..132446
Molecular Weight (calculated)
11334.4 Da
IEP (calculated)
7.287
GRAVY (calculated)
-0.201
Length
100 amino acids
Sequence
(BLAST)
(BLAST)
1: MLVDVIIIVN RVADYGNLTV ANALADNGRI QNHCSHLSCL KCSIEDGCNV AGYFAWSLMD NYEFGNGYTL RFGMNWVNFT NPADRREKDS GKWYSRFVAK
001: MAIPKAHYSL AVLVLLFVVV SSSQKVCNPE CKAKEPFHCD NTHAFNRTGF PRNFTFGAAT SAYQIEGAAH RALNGWDYFT HRYPEKVPDR SSGDLACDSY
101: DLYKDDVKLL KRMNVQAYRL SIAWSRVLPK GRLTGGVDEN GITYYNNLIN ELKANGIEPY VTIFHWDVPQ TLEDEYGGFL STRIVEDYTN YAELLFQRFG
201: DRVKFWITLN QPFSLATKGY GDGSYPPGRC TGCELGGDSG VEPYTVAHNQ LLAHAKTVSL YRKRYQKFQG GKIGTTLIGR WFAPLNEFSE LDKAAAKRAF
301: DFFVGWFLDP LVYGKYPTIM REMVGDRLPE FTPEQSALVK GSLDFLGLNY YVTQYATDAP PPTQLNAITD ARVTLGFYRN GVPIGVVAPS FVYYPPGFRQ
401: ILNYIKDNYK NPLTYITENG VADLDLGNVT LATALADNGR IQNHCSHLSC LKCAMKDGCN VAGYFAWSLM DNYEFGNGYT LRFGMNWVNF TNPADRKEKA
501: SGKWFSKFLA K
101: DLYKDDVKLL KRMNVQAYRL SIAWSRVLPK GRLTGGVDEN GITYYNNLIN ELKANGIEPY VTIFHWDVPQ TLEDEYGGFL STRIVEDYTN YAELLFQRFG
201: DRVKFWITLN QPFSLATKGY GDGSYPPGRC TGCELGGDSG VEPYTVAHNQ LLAHAKTVSL YRKRYQKFQG GKIGTTLIGR WFAPLNEFSE LDKAAAKRAF
301: DFFVGWFLDP LVYGKYPTIM REMVGDRLPE FTPEQSALVK GSLDFLGLNY YVTQYATDAP PPTQLNAITD ARVTLGFYRN GVPIGVVAPS FVYYPPGFRQ
401: ILNYIKDNYK NPLTYITENG VADLDLGNVT LATALADNGR IQNHCSHLSC LKCAMKDGCN VAGYFAWSLM DNYEFGNGYT LRFGMNWVNF TNPADRKEKA
501: SGKWFSKFLA K
Arabidopsis Description
TGG4Myrosinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GRX1]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.