Factsheet for AT1G47600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
golgi 5
endoplasmic reticulum 6
plasma membrane 4
vacuole 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030473.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	83.37	82.72
Bra014287.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	81.41	82.54
CDY46560	Canola	cytosol, vacuole	14.87	76.0
CDY29604	Canola	mitochondrion, plastid, vacuole	22.9	69.64
CDX87822	Canola	plasma membrane	17.03	69.05
AT1G51490.1	Thale cress	mitochondrion	50.49	62.62
AT5G26000.1	Thale cress	endoplasmic reticulum, vacuole	48.92	46.21
AT5G25980.2	Thale cress	endoplasmic reticulum, vacuole	49.12	45.89
AT5G48375.1	Thale cress	endoplasmic reticulum, vacuole	38.55	44.87

Protein Annotations

Gene3D:3.20.20.80	EntrezGene:841169	MapMan:9.5.2.1	ProteinID:AAD46026.1	ProteinID:ACO95139.1	ProteinID:AEE32191.1
ArrayExpress:AT1G47600	EnsemblPlantsGene:AT1G47600	RefSeq:AT1G47600	TAIR:AT1G47600	RefSeq:AT1G47600-TAIR-G	EnsemblPlants:AT1G47600.1
TAIR:AT1G47600.1	Unigene:At.25235	Symbol:BGLU34	EMBL:BT000471	EMBL:BT002202	EMBL:BT002458
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0008422	GO:GO:0009056	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719
GO:GO:0009725	GO:GO:0009987	GO:GO:0016787	GO:GO:0016798	GO:GO:0019137	GO:GO:0019748
GO:GO:0019760	GO:GO:0019762	GO:GO:0102483	GO:GO:0102799	InterPro:Glyco_hydro_1	InterPro:Glyco_hydro_1_AS
InterPro:Glyco_hydro_1_N_CS	InterPro:Glycoside_hydrolase_SF	RefSeq:NP_175191.2	PFAM:PF00232	PO:PO:0009005	PRINTS:PR00131
ScanProsite:PS00572	ScanProsite:PS00653	PANTHER:PTHR10353	PANTHER:PTHR10353:SF44	UniProt:Q8GRX1	SUPFAM:SSF51445
SignalP:SignalP-noTM	UniParc:UPI00000AE53B	SEG:seg	:	:	:

Description

TGG4Myrosinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GRX1]

Coordinates

chr1:+:17491731..17494779

Molecular Weight (calculated)

57545.3 Da

IEP (calculated)

8.214

GRAVY (calculated)

-0.290

Length

511 amino acids

Sequence
(BLAST)

001: MAIPKAHYSL AVLVLLFVVV SSSQKVCNPE CKAKEPFHCD NTHAFNRTGF PRNFTFGAAT SAYQIEGAAH RALNGWDYFT HRYPEKVPDR SSGDLACDSY
101: DLYKDDVKLL KRMNVQAYRL SIAWSRVLPK GRLTGGVDEN GITYYNNLIN ELKANGIEPY VTIFHWDVPQ TLEDEYGGFL STRIVEDYTN YAELLFQRFG
201: DRVKFWITLN QPFSLATKGY GDGSYPPGRC TGCELGGDSG VEPYTVAHNQ LLAHAKTVSL YRKRYQKFQG GKIGTTLIGR WFAPLNEFSE LDKAAAKRAF
301: DFFVGWFLDP LVYGKYPTIM REMVGDRLPE FTPEQSALVK GSLDFLGLNY YVTQYATDAP PPTQLNAITD ARVTLGFYRN GVPIGVVAPS FVYYPPGFRQ
401: ILNYIKDNYK NPLTYITENG VADLDLGNVT LATALADNGR IQNHCSHLSC LKCAMKDGCN VAGYFAWSLM DNYEFGNGYT LRFGMNWVNF TNPADRKEKA
501: SGKWFSKFLA K

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.