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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, vacuole

Predictor Summary:
  • plastid 2
  • vacuole 1
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46560 Canola cytosol, vacuole 48.81 82.0
CDX87822 Canola plasma membrane 52.38 69.84
CDY65716 Canola cytosol 29.76 36.76
CDY52412 Canola cytosol 17.86 33.71
CDY24996 Canola cytosol 34.52 32.95
CDY22731 Canola cytosol 33.93 32.39
CDY68654 Canola cytosol 34.52 32.22
CDY67044 Canola cytosol 2.38 23.53
Bra014287.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 70.24 23.41
AT1G47600.1 Thale cress endoplasmic reticulum, vacuole 69.64 22.9
CDY24995 Canola cytosol, plastid, vacuole 37.5 18.69
CDY09054 Canola vacuole 38.1 13.01
CDY52022 Canola cytosol 39.29 12.43
CDY09042 Canola vacuole 38.1 12.12
CDY22724 Canola cytosol 38.69 11.9
CDY39513 Canola endoplasmic reticulum, vacuole 36.9 11.79
CDY71022 Canola cytosol 37.5 11.78
CDY05334 Canola cytosol 36.9 11.76
CDY37226 Canola extracellular 38.69 11.75
CDY46331 Canola endoplasmic reticulum, vacuole 37.5 11.62
CDY26308 Canola cytosol 37.5 11.56
CDY67046 Canola extracellular 37.5 11.54
CDY07361 Canola endoplasmic reticulum 36.31 11.34
CDY71771 Canola cytosol, vacuole 15.48 7.12
CDY29614 Canola cytosol, peroxisome, vacuole 2.38 4.3
CDX90772 Canola mitochondrion 12.5 3.55
CDY22730 Canola mitochondrion 8.93 3.32
CDY70871 Canola mitochondrion, vacuole 3.57 2.63
CDY24999 Canola cytosol, mitochondrion 2.98 2.46
CDY04261 Canola vacuole 4.76 2.1
CDY72290 Canola cytosol, mitochondrion, vacuole 0.6 0.54
Protein Annotations
Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078GWU0UniProt:A0A078GWU0EnsemblPlants:CDY29604ProteinID:CDY29604
ProteinID:CDY29604.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00043344001InterPro:Glyco_hydro_1InterPro:Glyco_hydro_1_ASInterPro:Glycoside_hydrolase_SF
PFAM:PF00232PRINTS:PR00131ScanProsite:PS00572PANTHER:PTHR10353PANTHER:PTHR10353:SF44SUPFAM:SSF51445
UniParc:UPI0004EEDEE5:::::
Description
BnaA05g15660DBnaA05g15660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWU0]
Coordinates
chrLK032240:-:193140..194274
Molecular Weight (calculated)
19281.0 Da
IEP (calculated)
9.112
GRAVY (calculated)
-0.439
Length
168 amino acids
Sequence
(BLAST)
001: MLRCYHHSSF QHSNKSTKIL REIVWTIGNK LGYYRNGVPI GVQAPSFVYY PPGFRQILNY IKNKYGNPLT YITENGIGDL DMGNLTLPNA LADNGRIQNH
101: CSHISCLKCS IEDGCNVAGY FAWSLMDNYE FGNGYTLRFG MNWVNFTNPA DRREKDSGKW FSKFIIKQ
Best Arabidopsis Sequence Match ( AT1G47600.1 )
(BLAST)
001: MAIPKAHYSL AVLVLLFVVV SSSQKVCNPE CKAKEPFHCD NTHAFNRTGF PRNFTFGAAT SAYQIEGAAH RALNGWDYFT HRYPEKVPDR SSGDLACDSY
101: DLYKDDVKLL KRMNVQAYRL SIAWSRVLPK GRLTGGVDEN GITYYNNLIN ELKANGIEPY VTIFHWDVPQ TLEDEYGGFL STRIVEDYTN YAELLFQRFG
201: DRVKFWITLN QPFSLATKGY GDGSYPPGRC TGCELGGDSG VEPYTVAHNQ LLAHAKTVSL YRKRYQKFQG GKIGTTLIGR WFAPLNEFSE LDKAAAKRAF
301: DFFVGWFLDP LVYGKYPTIM REMVGDRLPE FTPEQSALVK GSLDFLGLNY YVTQYATDAP PPTQLNAITD ARVTLGFYRN GVPIGVVAPS FVYYPPGFRQ
401: ILNYIKDNYK NPLTYITENG VADLDLGNVT LATALADNGR IQNHCSHLSC LKCAMKDGCN VAGYFAWSLM DNYEFGNGYT LRFGMNWVNF TNPADRKEKA
501: SGKWFSKFLA K
Arabidopsis Description
TGG4Myrosinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GRX1]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.