Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52412 | Canola | cytosol | 23.53 | 4.49 |
| CDY46560 | Canola | cytosol, vacuole | 23.53 | 4.0 |
| CDX87822 | Canola | plasma membrane | 23.53 | 3.17 |
| CDY65716 | Canola | cytosol | 23.53 | 2.94 |
| CDY29604 | Canola | mitochondrion, plastid, vacuole | 23.53 | 2.38 |
| CDY22731 | Canola | cytosol | 23.53 | 2.27 |
| CDY24996 | Canola | cytosol | 23.53 | 2.27 |
| CDY68654 | Canola | cytosol | 23.53 | 2.22 |
| CDY24995 | Canola | cytosol, plastid, vacuole | 23.53 | 1.19 |
| VIT_13s0064g01600.t01 | Wine grape | cytosol, mitochondrion, plastid, vacuole | 11.76 | 0.86 |
| CDY09054 | Canola | vacuole | 23.53 | 0.81 |
| CDY39513 | Canola | endoplasmic reticulum, vacuole | 23.53 | 0.76 |
| CDY05334 | Canola | cytosol | 23.53 | 0.76 |
| CDY09042 | Canola | vacuole | 23.53 | 0.76 |
| CDY52022 | Canola | cytosol | 23.53 | 0.75 |
| CDY71022 | Canola | cytosol | 23.53 | 0.75 |
| CDY07361 | Canola | endoplasmic reticulum | 23.53 | 0.74 |
| CDY46331 | Canola | endoplasmic reticulum, vacuole | 23.53 | 0.74 |
| CDY26308 | Canola | cytosol | 23.53 | 0.73 |
| CDY22724 | Canola | cytosol | 23.53 | 0.73 |
| CDY67046 | Canola | extracellular | 23.53 | 0.73 |
| CDY37226 | Canola | extracellular | 23.53 | 0.72 |
| CDY22730 | Canola | mitochondrion | 11.76 | 0.44 |
| CDX90772 | Canola | mitochondrion | 11.76 | 0.34 |
| CDY29614 | Canola | cytosol, peroxisome, vacuole | 0.0 | 0.0 |
| CDY70871 | Canola | mitochondrion, vacuole | 0.0 | 0.0 |
| CDY24999 | Canola | cytosol, mitochondrion | 0.0 | 0.0 |
| CDY71771 | Canola | cytosol, vacuole | 0.0 | 0.0 |
| CDY72290 | Canola | cytosol, mitochondrion, vacuole | 0.0 | 0.0 |
| KRH24670 | Soybean | cytosol, nucleus, plastid | 0.0 | 0.0 |
| CDY04261 | Canola | vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY67044 | EnsemblPlantsGene:GSBRNA2T00058694001 | ProteinID:CDY67044 | ProteinID:CDY67044.1 | UniParc:UPI0004EE2090 | UniProt:A0A078JJU4 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaCnng53300DBnaCnng53300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJU4]
Coordinates
chrLK035701:-:3643..3696
Molecular Weight (calculated)
2015.3 Da
IEP (calculated)
4.673
GRAVY (calculated)
-1.635
Length
17 amino acids
Sequence
(BLAST)
(BLAST)
1: MTSEDDEERG KITKFKT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.