CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

plastid 3
extracellular 2
cytosol 1
vacuole 2
endoplasmic reticulum 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	extracellular
MultiLoc:	cytosol
Plant-mPloc:	plastid, vacuole
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0064g01600.t01	Wine grape	cytosol, mitochondrion, plastid, vacuole	48.25	23.61
CDY67044	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.20.20.80	MapMan:50.3.2	EMBL:ACUP02007180	EnsemblPlantsGene:GLYMA_12G054600	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008422
GO:GO:0009056	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009725	GO:GO:0009987
GO:GO:0016787	GO:GO:0019748	GO:GO:0019762	InterPro:Glyco_hydro_1	InterPro:Glycoside_hydrolase_SF	UniProt:K7LT77
EnsemblPlants:KRH24670	ProteinID:KRH24670	ProteinID:KRH24670.1	PFAM:PF00232	PANTHER:PTHR10353	PANTHER:PTHR10353:SF81
SUPFAM:SSF51445	UniParc:UPI00029555DF	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:3946253..3949354

Molecular Weight (calculated)

12846.5 Da

IEP (calculated)

6.497

GRAVY (calculated)

0.189

Length

114 amino acids

Sequence
(BLAST)

001: MSSEPCMSSH YQLLAHAAAV KIYKTYASQN GLIGITLNCH WFVPFSNDTL DHQASQRALD FMFGWFMQPL TTGNYPETMQ SLLGSRLPNF TGAIQATYWI
101: LTELTTSIAI FIIF

Best Arabidopsis Sequence Match ( AT2G44480.5 )
(BLAST)

001: MFAVLGYNVG NIAPGRCSSY VQNCTVGNSA TEPYLVAHYL ILSHAATVQL YREKYQSFHG GTIGMTIQTY WMIPKYNTPA CREAAKRALD FFFGWFADPI
101: TYGDYPKTMR ELVGNRLPKF TKKQSKMVRG SFDFFGLNYY TSRYVEDVMF YANTNLSYTT DSRVNQTTEK NGVPVGEPTS ADWLFICPEG FQDVLLYIKS
201: KFQNPVILVT ENGMPSENDK SLSVNIALND EAKIKYHQLH LTALLEAVSQ GADVRGYYIW SLMDDFEWEF GYKYRYGLVY VDFQDGLKRH LKSSALWYHH
301: FLSNSSSYQM D

Arabidopsis Description

BGLU17beta glucosidase 17 [Source:TAIR;Acc:AT2G44480]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.