Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- vacuole 5
- plasma membrane 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72290 | Canola | cytosol, mitochondrion, vacuole | 25.51 | 74.19 |
| Bra020549.1-P | Field mustard | cytosol | 35.12 | 72.52 |
| Bra020523.1-P | Field mustard | cytosol | 40.85 | 72.22 |
| CDY26308 | Canola | cytosol | 71.72 | 71.19 |
| AT5G25980.2 | Thale cress | endoplasmic reticulum, vacuole | 71.9 | 71.12 |
| CDY70871 | Canola | mitochondrion, vacuole | 29.76 | 70.61 |
| CDY67046 | Canola | extracellular | 71.16 | 70.51 |
| CDY37226 | Canola | extracellular | 70.61 | 69.08 |
| Bra032343.1-P | Field mustard | cytosol | 42.7 | 68.96 |
| CDY05334 | Canola | cytosol | 66.91 | 68.69 |
| Bra039823.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 70.06 | 68.66 |
| Bra039825.1-P | Field mustard | endoplasmic reticulum, extracellular, vacuole | 70.06 | 68.66 |
| CDY71022 | Canola | cytosol | 67.47 | 68.22 |
| CDY07361 | Canola | endoplasmic reticulum | 67.65 | 68.03 |
| Bra004012.1-P | Field mustard | endoplasmic reticulum | 67.47 | 67.84 |
| CDY52022 | Canola | cytosol | 66.54 | 67.8 |
| Bra039705.1-P | Field mustard | vacuole | 68.02 | 67.65 |
| CDY24996 | Canola | cytosol | 22.0 | 67.61 |
| CDY22724 | Canola | cytosol | 68.21 | 67.58 |
| Bra016676.1-P | Field mustard | endoplasmic reticulum, vacuole | 66.91 | 67.29 |
| CDY09042 | Canola | vacuole | 65.43 | 67.05 |
| CDY68654 | Canola | cytosol | 22.18 | 66.67 |
| CDY46331 | Canola | endoplasmic reticulum, vacuole | 66.54 | 66.42 |
| CDY39513 | Canola | endoplasmic reticulum, vacuole | 64.33 | 66.16 |
| CDY04261 | Canola | vacuole | 46.58 | 66.14 |
| CDY24995 | Canola | cytosol, plastid, vacuole | 41.04 | 65.88 |
| Bra038094.1-P | Field mustard | cytosol | 52.31 | 65.81 |
| CDY65716 | Canola | cytosol | 16.45 | 65.44 |
| Bra023838.1-P | Field mustard | endoplasmic reticulum, vacuole | 62.11 | 65.24 |
| CDY22731 | Canola | cytosol | 21.07 | 64.77 |
| CDY09054 | Canola | vacuole | 58.23 | 64.02 |
| CDY24999 | Canola | cytosol, mitochondrion | 23.66 | 63.05 |
| CDY29614 | Canola | cytosol, peroxisome, vacuole | 10.72 | 62.37 |
| AT5G48375.1 | Thale cress | endoplasmic reticulum, vacuole | 50.09 | 61.73 |
| AT1G47600.1 | Thale cress | endoplasmic reticulum, vacuole | 46.21 | 48.92 |
| CDY22730 | Canola | mitochondrion | 36.97 | 44.25 |
| CDX90772 | Canola | mitochondrion | 47.32 | 43.24 |
| AT1G51490.1 | Thale cress | mitochondrion | 30.68 | 40.29 |
Protein Annotations
| Gene3D:3.20.20.80 | EntrezGene:832669 | MapMan:9.5.2.1 | UniProt:A0A178U7L7 | ProteinID:AAD40143.1 | ProteinID:AED93511.1 |
| ProteinID:AED93512.1 | EMBL:AF083677 | EMBL:AK317589 | ArrayExpress:AT5G26000 | EnsemblPlantsGene:AT5G26000 | RefSeq:AT5G26000 |
| TAIR:AT5G26000 | RefSeq:AT5G26000-TAIR-G | EnsemblPlants:AT5G26000.1 | TAIR:AT5G26000.1 | EMBL:AY045681 | EMBL:AY054237 |
| EMBL:AY058182 | EMBL:AY090382 | Unigene:At.23592 | ProteinID:CAA55786.1 | ProteinID:CAH40799.1 | ProteinID:CAH40800.1 |
| ProteinID:CAH40801.1 | ProteinID:CAH40802.1 | ProteinID:CAH40803.1 | ProteinID:CAH40804.1 | ProteinID:CAH40805.1 | ProteinID:CAH40806.1 |
| ProteinID:CAH40807.1 | ProteinID:CAH40808.1 | ProteinID:CAH40809.1 | ProteinID:CAH40810.1 | ProteinID:CAH40811.1 | ProteinID:CAH40812.1 |
| ProteinID:CAH40813.1 | ProteinID:CAH40814.1 | ProteinID:CAH40815.1 | ProteinID:CAH40816.1 | ProteinID:CAH40817.1 | ProteinID:CAH40818.1 |
| ProteinID:CAH40819.1 | ProteinID:CAH40820.1 | ProteinID:CAH40821.1 | ProteinID:CAH40822.1 | ProteinID:CAH40823.1 | ProteinID:CAH40824.1 |
| ProteinID:CAH40825.1 | ProteinID:CAH40826.1 | GO:GO:0002213 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005777 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0005975 |
| GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008422 | GO:GO:0009056 | GO:GO:0009505 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009579 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009625 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 |
| GO:GO:0009737 | GO:GO:0009738 | GO:GO:0009987 | GO:GO:0010119 | GO:GO:0016787 | GO:GO:0016798 |
| GO:GO:0019137 | GO:GO:0019748 | GO:GO:0019762 | GO:GO:0022626 | GO:GO:0030312 | GO:GO:0046872 |
| GO:GO:0048046 | GO:GO:0102483 | GO:GO:0102799 | InterPro:Glyco_hydro_1 | InterPro:Glyco_hydro_1_AS | InterPro:Glyco_hydro_1_N_CS |
| InterPro:Glycoside_hydrolase_SF | EMBL:L11454 | RefSeq:NP_197972.2 | RefSeq:NP_851077.1 | ProteinID:OAO89803.1 | UniProt:P37702 |
| PFAM:PF00232 | PO:PO:0000293 | PO:PO:0005417 | PO:PO:0006339 | PO:PO:0007131 | PO:PO:0009001 |
| PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009047 | PO:PO:0009062 | PRINTS:PR00131 |
| ScanProsite:PS00572 | ScanProsite:PS00653 | PANTHER:PTHR10353 | PANTHER:PTHR10353:SF44 | SUPFAM:SSF51445 | SignalP:SignalP-noTM |
| Symbol:TGG1 | UniParc:UPI0000000BA9 | EMBL:Z18232 | SEG:seg | : | : |
Description
TGG1TGG1 [Source:UniProtKB/TrEMBL;Acc:A0A178U7L7]
Coordinates
chr5:-:9079452..9082384
Molecular Weight (calculated)
61135.9 Da
IEP (calculated)
5.703
GRAVY (calculated)
-0.404
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLLMLAFVF LLALATCKGD EFVCEENEPF TCNQTKLFNS GNFEKGFIFG VASSAYQVEG GRGRGLNVWD SFTHRFPEKG GADLGNGDTT CDSYTLWQKD
101: IDVMDELNST GYRFSIAWSR LLPKGKRSRG VNPGAIKYYN GLIDGLVAKN MTPFVTLFHW DLPQTLQDEY NGFLNKTIVD DFKDYADLCF ELFGDRVKNW
201: ITINQLYTVP TRGYALGTDA PGRCSPKIDV RCPGGNSSTE PYIVAHNQLL AHAAAVDVYR TKYKDDQKGM IGPVMITRWF LPFDHSQESK DATERAKIFF
301: HGWFMGPLTE GKYPDIMREY VGDRLPEFSE TEAALVKGSY DFLGLNYYVT QYAQNNQTIV PSDVHTALMD SRTTLTSKNA TGHAPGPPFN AASYYYPKGI
401: YYVMDYFKTT YGDPLIYVTE NGFSTPGDED FEKATADYKR IDYLCSHLCF LSKVIKEKNV NVKGYFAWSL GDNYEFCNGF TVRFGLSYVD FANITGDRDL
501: KASGKWFQKF INVTDEDSTN QDLLRSSVSS KNRDRKSLAD A
101: IDVMDELNST GYRFSIAWSR LLPKGKRSRG VNPGAIKYYN GLIDGLVAKN MTPFVTLFHW DLPQTLQDEY NGFLNKTIVD DFKDYADLCF ELFGDRVKNW
201: ITINQLYTVP TRGYALGTDA PGRCSPKIDV RCPGGNSSTE PYIVAHNQLL AHAAAVDVYR TKYKDDQKGM IGPVMITRWF LPFDHSQESK DATERAKIFF
301: HGWFMGPLTE GKYPDIMREY VGDRLPEFSE TEAALVKGSY DFLGLNYYVT QYAQNNQTIV PSDVHTALMD SRTTLTSKNA TGHAPGPPFN AASYYYPKGI
401: YYVMDYFKTT YGDPLIYVTE NGFSTPGDED FEKATADYKR IDYLCSHLCF LSKVIKEKNV NVKGYFAWSL GDNYEFCNGF TVRFGLSYVD FANITGDRDL
501: KASGKWFQKF INVTDEDSTN QDLLRSSVSS KNRDRKSLAD A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.