Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- vacuole 5
- plasma membrane 4
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
AT5G26000.1 | Thale cress | endoplasmic reticulum, vacuole | 71.12 | 71.9 |
AT5G48375.1 | Thale cress | endoplasmic reticulum, vacuole | 53.02 | 66.06 |
CDY52412 | Canola | cytosol | 8.41 | 51.69 |
AT1G47600.1 | Thale cress | endoplasmic reticulum, vacuole | 45.89 | 49.12 |
AT1G51490.1 | Thale cress | mitochondrion | 30.16 | 40.05 |
Bra020551.1-P | Field mustard | cytosol | 8.59 | 36.72 |
Protein Annotations
Gene3D:3.20.20.80 | EntrezGene:832667 | MapMan:9.5.2.1 | ProteinID:AAD40134.1 | ProteinID:AED93507.1 | ProteinID:AED93508.1 |
ProteinID:AED93509.1 | EMBL:AF083717 | EMBL:AF360348 | EMBL:AF361821 | EMBL:AK221048 | EMBL:AK221982 |
EMBL:AK226328 | ArrayExpress:AT5G25980 | EnsemblPlantsGene:AT5G25980 | RefSeq:AT5G25980 | TAIR:AT5G25980 | RefSeq:AT5G25980-TAIR-G |
EnsemblPlants:AT5G25980.2 | TAIR:AT5G25980.2 | EMBL:AY078042 | EMBL:AY113880 | Unigene:At.22698 | ProteinID:CAA55787.1 |
GO:GO:0002213 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005576 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005777 | GO:GO:0005829 |
GO:GO:0005840 | GO:GO:0005975 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008422 | GO:GO:0009056 | GO:GO:0009506 | GO:GO:0009507 |
GO:GO:0009536 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009719 |
GO:GO:0009737 | GO:GO:0009738 | GO:GO:0009987 | GO:GO:0010119 | GO:GO:0016787 | GO:GO:0016798 |
GO:GO:0019137 | GO:GO:0019748 | GO:GO:0019762 | GO:GO:0022626 | GO:GO:0048046 | GO:GO:0102799 |
InterPro:Glyco_hydro_1 | InterPro:Glyco_hydro_1_AS | InterPro:Glyco_hydro_1_N_CS | InterPro:Glycoside_hydrolase_SF | RefSeq:NP_001031940.1 | RefSeq:NP_568479.1 |
RefSeq:NP_851076.2 | PFAM:PF00232 | PO:PO:0000293 | PO:PO:0005020 | PO:PO:0005417 | PO:PO:0007131 |
PO:PO:0009001 | PO:PO:0009025 | PRINTS:PR00131 | ScanProsite:PS00572 | ScanProsite:PS00653 | PANTHER:PTHR10353 |
PANTHER:PTHR10353:SF44 | UniProt:Q9C5C2 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | Symbol:TGG2 | TMHMM:TMhelix |
UniParc:UPI00000A0844 | : | : | : | : | : |
Description
TGG2Myrosinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C2]
Coordinates
chr5:+:9072708..9075777
Molecular Weight (calculated)
62735.3 Da
IEP (calculated)
7.485
GRAVY (calculated)
-0.442
Length
547 amino acids
Sequence
(BLAST)
(BLAST)
001: MQHNTYIYIL TMKLLGFALA ILLVVATCKP EEEITCEENV PFTCSQTDRF NKQDFESDFI FGVASSAYQI EGGRGRGLNV WDGFTHRYPE KGGADLGNGD
101: TTCDSYRTWQ KDLDVMEELG VKGYRFSFAW SRILPKGKRS RGINEDGINY YSGLIDGLIA RNITPFVTLF HWDLPQSLQD EYEGFLDRTI IDDFKDYADL
201: CFERFGDRVK HWITINQLFT VPTRGYALGT DAPGRCSQWV DKRCYGGDSS TEPYIVAHNQ LLAHATVVDL YRTRYKYQGG KIGPVMITRW FLPYDDTLES
301: KQATWRAKEF FLGWFMEPLT KGKYPYIMRK LVGNRLPKFN STEARLLKGS YDFLGLNYYV TQYAHALDPS PPEKLTAMTD SLANLTSLDA NGQPPGPPFS
401: KGSYYHPRGM LNVMEHFKTK YGDPLIYVTE NGFSTSGGPI PFTEAFHDYN RIDYLCSHLC FLRKAIKEKR VNVKGYFVWS LGDNYEFCNG YTVRFGLSYV
501: DFNNVTADRD LKASGLWYQS FLRDTTKNQD ILRSSLPFKN GDRKSLT
101: TTCDSYRTWQ KDLDVMEELG VKGYRFSFAW SRILPKGKRS RGINEDGINY YSGLIDGLIA RNITPFVTLF HWDLPQSLQD EYEGFLDRTI IDDFKDYADL
201: CFERFGDRVK HWITINQLFT VPTRGYALGT DAPGRCSQWV DKRCYGGDSS TEPYIVAHNQ LLAHATVVDL YRTRYKYQGG KIGPVMITRW FLPYDDTLES
301: KQATWRAKEF FLGWFMEPLT KGKYPYIMRK LVGNRLPKFN STEARLLKGS YDFLGLNYYV TQYAHALDPS PPEKLTAMTD SLANLTSLDA NGQPPGPPFS
401: KGSYYHPRGM LNVMEHFKTK YGDPLIYVTE NGFSTSGGPI PFTEAFHDYN RIDYLCSHLC FLRKAIKEKR VNVKGYFVWS LGDNYEFCNG YTVRFGLSYV
501: DFNNVTADRD LKASGLWYQS FLRDTTKNQD ILRSSLPFKN GDRKSLT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.