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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • endoplasmic reticulum 6
  • golgi 5
  • extracellular 5
  • vacuole 5
  • plasma membrane 4
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT5G26000.1 Thale cress endoplasmic reticulum, vacuole 71.12 71.9
AT5G48375.1 Thale cress endoplasmic reticulum, vacuole 53.02 66.06
CDY52412 Canola cytosol 8.41 51.69
AT1G47600.1 Thale cress endoplasmic reticulum, vacuole 45.89 49.12
AT1G51490.1 Thale cress mitochondrion 30.16 40.05
Bra020551.1-P Field mustard cytosol 8.59 36.72
Protein Annotations
Gene3D:3.20.20.80EntrezGene:832667MapMan:9.5.2.1ProteinID:AAD40134.1ProteinID:AED93507.1ProteinID:AED93508.1
ProteinID:AED93509.1EMBL:AF083717EMBL:AF360348EMBL:AF361821EMBL:AK221048EMBL:AK221982
EMBL:AK226328ArrayExpress:AT5G25980EnsemblPlantsGene:AT5G25980RefSeq:AT5G25980TAIR:AT5G25980RefSeq:AT5G25980-TAIR-G
EnsemblPlants:AT5G25980.2TAIR:AT5G25980.2EMBL:AY078042EMBL:AY113880Unigene:At.22698ProteinID:CAA55787.1
GO:GO:0002213GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005575GO:GO:0005576
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005777GO:GO:0005829
GO:GO:0005840GO:GO:0005975GO:GO:0006950GO:GO:0006952GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0008422GO:GO:0009056GO:GO:0009506GO:GO:0009507
GO:GO:0009536GO:GO:0009605GO:GO:0009607GO:GO:0009628GO:GO:0009651GO:GO:0009719
GO:GO:0009737GO:GO:0009738GO:GO:0009987GO:GO:0010119GO:GO:0016787GO:GO:0016798
GO:GO:0019137GO:GO:0019748GO:GO:0019762GO:GO:0022626GO:GO:0048046GO:GO:0102799
InterPro:Glyco_hydro_1InterPro:Glyco_hydro_1_ASInterPro:Glyco_hydro_1_N_CSInterPro:Glycoside_hydrolase_SFRefSeq:NP_001031940.1RefSeq:NP_568479.1
RefSeq:NP_851076.2PFAM:PF00232PO:PO:0000293PO:PO:0005020PO:PO:0005417PO:PO:0007131
PO:PO:0009001PO:PO:0009025PRINTS:PR00131ScanProsite:PS00572ScanProsite:PS00653PANTHER:PTHR10353
PANTHER:PTHR10353:SF44UniProt:Q9C5C2SUPFAM:SSF51445SignalP:SignalP-noTMSymbol:TGG2TMHMM:TMhelix
UniParc:UPI00000A0844:::::
Description
TGG2Myrosinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5C2]
Coordinates
chr5:+:9072708..9075777
Molecular Weight (calculated)
62735.3 Da
IEP (calculated)
7.485
GRAVY (calculated)
-0.442
Length
547 amino acids
Sequence
(BLAST)
001: MQHNTYIYIL TMKLLGFALA ILLVVATCKP EEEITCEENV PFTCSQTDRF NKQDFESDFI FGVASSAYQI EGGRGRGLNV WDGFTHRYPE KGGADLGNGD
101: TTCDSYRTWQ KDLDVMEELG VKGYRFSFAW SRILPKGKRS RGINEDGINY YSGLIDGLIA RNITPFVTLF HWDLPQSLQD EYEGFLDRTI IDDFKDYADL
201: CFERFGDRVK HWITINQLFT VPTRGYALGT DAPGRCSQWV DKRCYGGDSS TEPYIVAHNQ LLAHATVVDL YRTRYKYQGG KIGPVMITRW FLPYDDTLES
301: KQATWRAKEF FLGWFMEPLT KGKYPYIMRK LVGNRLPKFN STEARLLKGS YDFLGLNYYV TQYAHALDPS PPEKLTAMTD SLANLTSLDA NGQPPGPPFS
401: KGSYYHPRGM LNVMEHFKTK YGDPLIYVTE NGFSTSGGPI PFTEAFHDYN RIDYLCSHLC FLRKAIKEKR VNVKGYFVWS LGDNYEFCNG YTVRFGLSYV
501: DFNNVTADRD LKASGLWYQS FLRDTTKNQD ILRSSLPFKN GDRKSLT
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.