Factsheet for PGSC0003DMT400026491

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
vacuole 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026493	Potato	extracellular, golgi, vacuole	85.43	75.0
PGSC0003DMT400011188	Potato	endoplasmic reticulum	58.61	50.86
PGSC0003DMT400086163	Potato	cytosol	38.74	50.21
PGSC0003DMT400012877	Potato	endoplasmic reticulum, extracellular, vacuole	52.98	47.06
PGSC0003DMT400026461	Potato	extracellular	52.98	47.06
PGSC0003DMT400012881	Potato	endoplasmic reticulum	52.65	46.76
PGSC0003DMT400026464	Potato	endoplasmic reticulum, extracellular	52.65	46.22
PGSC0003DMT400026457	Potato	extracellular	47.68	45.86
PGSC0003DMT400012885	Potato	extracellular	46.36	45.31
PGSC0003DMT400026448	Potato	endoplasmic reticulum, extracellular, vacuole	50.66	44.09
GSMUA_Achr6P13620_001	Banana	extracellular, vacuole	45.7	41.57
KRH50168	Soybean	nucleus	44.37	39.41
PGSC0003DMT400039210	Potato	endoplasmic reticulum	46.03	38.61
PGSC0003DMT400025691	Potato	endoplasmic reticulum, extracellular	45.03	38.2
PGSC0003DMT400075600	Potato	vacuole	44.04	38.11
PGSC0003DMT400053921	Potato	extracellular	45.36	37.64
PGSC0003DMT400027975	Potato	endoplasmic reticulum	44.37	37.53
PGSC0003DMT400064314	Potato	endoplasmic reticulum, extracellular, vacuole	43.05	36.01
PGSC0003DMT400009624	Potato	extracellular	42.05	28.93
PGSC0003DMT400020654	Potato	cytosol	41.72	28.44
PGSC0003DMT400066566	Potato	endoplasmic reticulum	42.38	27.23

Protein Annotations

Gene3D:3.90.70.10	MapMan:50.3.4	MEROPS:C01.140	GO:GO:0003674	GO:GO:0003824	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008234	GO:GO:0016787	GO:GO:0019538	UniProt:M1AN79
PFAM:PF00112	PFAM:PF08246	EnsemblPlantsGene:PGSC0003DMG400010223	PGSC:PGSC0003DMG400010223	EnsemblPlants:PGSC0003DMT400026491	PRINTS:PR00705
ScanProsite:PS00639	ScanProsite:PS00640	PANTHER:PTHR12411	PANTHER:PTHR12411:SF418	InterPro:Papain_like_cys_pep_sf	InterPro:Pept_asp_AS
InterPro:Pept_his_AS	InterPro:Peptidase_C1A	InterPro:Peptidase_C1A_C	InterPro:Prot_inhib_I29	SMART:SM00645	SMART:SM00848
SUPFAM:SSF54001	UniParc:UPI0002954DBE	:	:	:	:

Description

Phytophthora-inhibited protease 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400010223]

Coordinates

chr2:+:32419589..32421499

Molecular Weight (calculated)

33272.6 Da

IEP (calculated)

4.612

GRAVY (calculated)

-0.417

Length

302 amino acids

Sequence
(BLAST)

001: MARHERAYKD EIEKEHRFKT FKKNVKFIES FNKNGTQRYK LAVNKYADLT TEEFTASYMG LDTSLLSQQE STDTTTSFKY GSVTEVPYSM DWRNSGSVTE
101: IKDQGVCSCC WAFSAVAAIE GAYQIANNEQ ISLSEQQLID CSTQNNGCKG GLMTNAYNFL LQNNVEGITT ESNYPYEETQ SICSTELQSA AVTISGYEVV
201: PASESALLQA VANQPISVGV AANEEFHFYN GGIYEGSCSP KLNHAVTVIG YGTSEEDGTK YWIVKNSWGR GWGEEGYMRI ARDVGVDGGH CGIAKIASFP
301: TV

Best Arabidopsis Sequence Match ( AT1G29080.1 )
(BLAST)

001: MDFVEFVCVV LTIFFMDLKI SEATSRVALY KPSSIVDYHQ QWMIQFSRVY DDEFEKQLRL QVLTENLKFI ESFNNMGNQS YKLGVNEFTD WTKEEFLATY
101: TGLRGVNVTS PFEVVNETKP AWNWTVSDVL GTNKDWRNEG AVTPVKSQGE CGGCWAFSAI AAVEGLTKIA RGNLISLSEQ QLLDCTREQN NGCKGGTFVN
201: AFNYIIKHRG ISSENEYPYQ VKEGPCRSNA RPAILIRGFE NVPSNNERAL LEAVSRQPVA VAIDASEAGF VHYSGGVYNA RNCGTSVNHA VTLVGYGTSP
301: EGMKYWLAKN SWGKTWGENG YIRIRRDVEW PQGMCGVAQY ASYPVA

Arabidopsis Description

Papain family cysteine protease [Source:UniProtKB/TrEMBL;Acc:Q9LP39]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.