Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 7
- plasma membrane 4
- golgi 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400026491 | Potato | nucleus | 41.57 | 45.7 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 47.29 | 43.73 |
| GSMUA_Achr2P04950_001 | Banana | endoplasmic reticulum, golgi | 45.78 | 43.55 |
| PGSC0003DMT400011188 | Potato | endoplasmic reticulum | 45.18 | 43.1 |
| PGSC0003DMT400026493 | Potato | extracellular, golgi, vacuole | 43.67 | 42.15 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 45.18 | 42.13 |
| PGSC0003DMT400026464 | Potato | endoplasmic reticulum, extracellular | 43.37 | 41.86 |
| Solyc03g006210.1.1 | Tomato | extracellular | 43.37 | 41.62 |
| Solyc02g077040.2.1 | Tomato | extracellular | 43.07 | 41.45 |
| GSMUA_Achr8P03350_001 | Banana | endoplasmic reticulum, extracellular, vacuole | 41.57 | 41.44 |
| GSMUA_Achr3P03740_001 | Banana | endoplasmic reticulum | 43.98 | 41.36 |
| Solyc02g076980.2.1 | Tomato | endoplasmic reticulum, golgi | 42.47 | 40.87 |
| KRH50168 | Soybean | nucleus | 41.27 | 40.29 |
| GSMUA_Achr3P11680_001 | Banana | endoplasmic reticulum, vacuole | 43.37 | 36.83 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular, golgi | 35.54 | 34.4 |
| GSMUA_Achr1P15920_001 | Banana | endoplasmic reticulum | 48.19 | 34.04 |
| GSMUA_Achr4P17710_001 | Banana | endoplasmic reticulum, extracellular | 44.58 | 33.64 |
| GSMUA_Achr3P01000_001 | Banana | endoplasmic reticulum | 46.69 | 33.05 |
| GSMUA_Achr4P12910_001 | Banana | endoplasmic reticulum | 46.69 | 32.77 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 46.08 | 32.62 |
| GSMUA_Achr1P09800_001 | Banana | endoplasmic reticulum | 46.39 | 32.56 |
| GSMUA_Achr4P06140_001 | Banana | endoplasmic reticulum | 45.78 | 32.41 |
Protein Annotations
| Gene3D:3.90.70.10 | MapMan:50.3.4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008234 | GO:GO:0016787 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr6G13620_001 |
| EnsemblPlants:GSMUA_Achr6P13620_001 | EnsemblPlants:GSMUA_Achr6T13620_001 | UniProt:M0T6R0 | PFAM:PF00112 | PFAM:PF08246 | PRINTS:PR00705 |
| ScanProsite:PS00139 | ScanProsite:PS00639 | ScanProsite:PS00640 | PANTHER:PTHR12411 | PANTHER:PTHR12411:SF297 | InterPro:Papain_like_cys_pep_sf |
| InterPro:Pept_asp_AS | InterPro:Pept_cys_AS | InterPro:Pept_his_AS | InterPro:Peptidase_C1A | InterPro:Peptidase_C1A_C | InterPro:Prot_inhib_I29 |
| SMART:SM00645 | SMART:SM00848 | SUPFAM:SSF54001 | UniParc:UPI0002967BA4 | SEG:seg | : |
Description
Putative Vignain [Source:GMGC_GENE;Acc:GSMUA_Achr6G13620_001]
Coordinates
chr6:-:9063745..9064855
Molecular Weight (calculated)
36476.8 Da
IEP (calculated)
4.876
GRAVY (calculated)
-0.238
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MDCALKIGAL LFLAYGWWGW RTTLGSTPVD MFEQWIAQHG RAYEDKAEKL YRLGVFTRNM EHVNAFLQAG GHSYTIGLNR FADLTKEEFL ATYTTGRMRP
101: SDASYPGLQP FRYVNMTAPS SIDWRNKGVV TPVKDQETCG SCWAFSAVAS MESINMIAKG SLIPLSEQQL LACDDNDDGC GGGLHYRAFS YVVSNGGITT
201: EANYPYQPNE STCNSTKQSD HAVSITGYGI VPTNDEKLLM NAVANQPVSV SIDAGEFQFY AGGIFDGPCD TYLNHEVTLV GYGTDENGTA YWIAKNSWGT
301: SWGDHGYILL KKDVAQKEGL CGLAIRASYP II
101: SDASYPGLQP FRYVNMTAPS SIDWRNKGVV TPVKDQETCG SCWAFSAVAS MESINMIAKG SLIPLSEQQL LACDDNDDGC GGGLHYRAFS YVVSNGGITT
201: EANYPYQPNE STCNSTKQSD HAVSITGYGI VPTNDEKLLM NAVANQPVSV SIDAGEFQFY AGGIFDGPCD TYLNHEVTLV GYGTDENGTA YWIAKNSWGT
301: SWGDHGYILL KKDVAQKEGL CGLAIRASYP II
001: MDFVEFVCVV LTIFFMDLKI SEATSRVALY KPSSIVDYHQ QWMIQFSRVY DDEFEKQLRL QVLTENLKFI ESFNNMGNQS YKLGVNEFTD WTKEEFLATY
101: TGLRGVNVTS PFEVVNETKP AWNWTVSDVL GTNKDWRNEG AVTPVKSQGE CGGCWAFSAI AAVEGLTKIA RGNLISLSEQ QLLDCTREQN NGCKGGTFVN
201: AFNYIIKHRG ISSENEYPYQ VKEGPCRSNA RPAILIRGFE NVPSNNERAL LEAVSRQPVA VAIDASEAGF VHYSGGVYNA RNCGTSVNHA VTLVGYGTSP
301: EGMKYWLAKN SWGKTWGENG YIRIRRDVEW PQGMCGVAQY ASYPVA
101: TGLRGVNVTS PFEVVNETKP AWNWTVSDVL GTNKDWRNEG AVTPVKSQGE CGGCWAFSAI AAVEGLTKIA RGNLISLSEQ QLLDCTREQN NGCKGGTFVN
201: AFNYIIKHRG ISSENEYPYQ VKEGPCRSNA RPAILIRGFE NVPSNNERAL LEAVSRQPVA VAIDASEAGF VHYSGGVYNA RNCGTSVNHA VTLVGYGTSP
301: EGMKYWLAKN SWGKTWGENG YIRIRRDVEW PQGMCGVAQY ASYPVA
Arabidopsis Description
Papain family cysteine protease [Source:UniProtKB/TrEMBL;Acc:Q9LP39]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.