Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G443500.1 | Wheat | cytosol | 80.75 | 97.47 |
| TraesCS7B01G354900.1 | Wheat | plastid | 89.54 | 87.7 |
| KXG32973 | Sorghum | cytosol | 64.02 | 75.0 |
| KXG32976 | Sorghum | cytosol | 62.76 | 74.26 |
| TraesCS7A01G454500.1 | Wheat | cytosol | 65.27 | 73.24 |
| Zm00001d044095_P001 | Maize | extracellular | 61.09 | 73.0 |
| TraesCS7A01G454300.1 | Wheat | extracellular, plastid | 72.8 | 70.73 |
| TraesCS3A01G230000.2 | Wheat | plastid | 74.9 | 69.11 |
| Zm00001d044096_P001 | Maize | cytosol | 62.34 | 62.34 |
| Os01t0639900-01 | Rice | extracellular, nucleus | 70.71 | 62.13 |
| Zm00001d011454_P001 | Maize | plastid | 63.6 | 62.04 |
| GSMUA_Achr1P13950_001 | Banana | cytosol | 50.63 | 60.2 |
| GSMUA_Achr7P26920_001 | Banana | cytosol | 49.79 | 59.2 |
| GSMUA_Achr3P31010_001 | Banana | cytosol | 48.95 | 58.21 |
| PGSC0003DMT400017914 | Potato | cytosol | 30.96 | 51.75 |
| TraesCS3A01G230100.1 | Wheat | cytosol, plastid | 53.14 | 50.8 |
| CDY64836 | Canola | plastid | 41.84 | 49.75 |
| GSMUA_Achr9P07050_001 | Banana | plastid | 51.46 | 47.13 |
| GSMUA_Achr4P14900_001 | Banana | plastid | 51.46 | 46.24 |
| GSMUA_Achr6P27350_001 | Banana | plasma membrane, plastid | 51.46 | 45.39 |
| Solyc02g067750.2.1 | Tomato | plastid | 47.7 | 44.71 |
| VIT_01s0127g00720.t01 | Wine grape | cytosol | 47.7 | 44.53 |
| Bra023485.1-P | Field mustard | cytosol | 47.7 | 44.02 |
| CDX85584 | Canola | cytosol | 47.7 | 44.02 |
| CDX91024 | Canola | cytosol | 47.7 | 44.02 |
| PGSC0003DMT400079571 | Potato | cytosol | 46.03 | 42.97 |
| KRH45667 | Soybean | nucleus | 46.44 | 42.86 |
| KRG99341 | Soybean | nucleus | 43.1 | 42.74 |
| Bra007912.1-P | Field mustard | cytosol | 46.03 | 42.64 |
| Bra018698.1-P | Field mustard | cytosol | 46.03 | 42.47 |
| CDY69444 | Canola | cytosol | 45.61 | 42.25 |
| Bra016223.1-P | Field mustard | cytosol | 45.61 | 42.25 |
| CDX93638 | Canola | cytosol | 39.75 | 42.04 |
| Bra018699.1-P | Field mustard | cytosol | 39.75 | 42.04 |
| Bra012384.1-P | Field mustard | cytosol | 45.19 | 41.86 |
| CDY25799 | Canola | cytosol | 45.19 | 41.7 |
| Bra024615.1-P | Field mustard | cytosol | 45.19 | 41.7 |
| CDY61543 | Canola | cytosol | 45.19 | 41.7 |
| Solyc05g005490.2.1 | Tomato | plastid | 46.44 | 41.42 |
| KRH69565 | Soybean | nucleus | 48.12 | 41.37 |
| CDY28477 | Canola | cytosol | 44.77 | 41.31 |
| AT1G23730.2 | Thale cress | cytosol | 44.35 | 41.09 |
| CDX93637 | Canola | cytosol | 38.49 | 41.07 |
| KRH74596 | Soybean | nucleus | 47.7 | 41.01 |
| CDY47630 | Canola | cytosol | 40.17 | 40.85 |
| CDY64834 | Canola | cytosol | 43.93 | 40.54 |
| AT1G70410.2 | Thale cress | cytosol | 47.28 | 40.36 |
| VIT_17s0000g08450.t01 | Wine grape | cytosol | 43.1 | 39.77 |
| CDY57304 | Canola | cytosol | 46.44 | 39.64 |
| CDY03752 | Canola | cytosol | 46.44 | 39.64 |
| CDY57847 | Canola | plastid | 46.03 | 39.29 |
| VIT_17s0000g08460.t01 | Wine grape | cytosol | 42.26 | 38.7 |
| KRH54402 | Soybean | cytosol | 41.0 | 37.55 |
| PGSC0003DMT400001297 | Potato | cytosol, extracellular, plastid | 47.7 | 35.51 |
| Solyc02g086820.2.1 | Tomato | plastid | 47.28 | 35.2 |
| AT5G14740.1 | Thale cress | plastid | 48.54 | 35.05 |
| KXG32970 | Sorghum | cytosol | 65.69 | 35.04 |
| VIT_14s0066g01210.t01 | Wine grape | plastid | 48.95 | 34.93 |
| Zm00001d044099_P002 | Maize | plastid | 65.27 | 34.51 |
| Bra039113.1-P | Field mustard | plastid | 47.7 | 34.13 |
| Bra040520.1-P | Field mustard | plastid | 47.28 | 33.93 |
| AT3G01500.2 | Thale cress | plastid | 48.12 | 33.14 |
| CDY28672 | Canola | plastid | 47.28 | 32.85 |
| VIT_11s0065g00100.t01 | Wine grape | cytosol | 26.36 | 32.64 |
| KRG93289 | Soybean | nucleus, plastid | 45.61 | 31.96 |
| VIT_17s0000g08470.t01 | Wine grape | plastid | 22.59 | 31.95 |
| KRH56601 | Soybean | plastid | 45.19 | 31.86 |
| CDY37516 | Canola | plastid | 42.68 | 29.57 |
| TraesCS5A01G245700.2 | Wheat | mitochondrion | 37.66 | 28.39 |
| CDY49059 | Canola | plastid | 42.68 | 26.77 |
Protein Annotations
| KEGG:00910+4.2.1.1 | Gene3D:3.40.1050.10 | MapMan:35.1 | InterPro:Carbonic_anhydrase | InterPro:Carbonic_anhydrase_CS | InterPro:Carbonic_anhydrase_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004089 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008270 |
| GO:GO:0015976 | InterPro:IPR036874 | PFAM:PF00484 | ScanProsite:PS00704 | ScanProsite:PS00705 | PANTHER:PTHR11002 |
| PANTHER:PTHR11002:SF24 | SMART:SM00947 | SUPFAM:SSF53056 | EnsemblPlantsGene:TraesCS7A01G454400 | EnsemblPlants:TraesCS7A01G454400.1 | TIGR:cd00884 |
Description
No Description!
Coordinates
chr7A:-:649150616..649154151
Molecular Weight (calculated)
26505.7 Da
IEP (calculated)
6.502
GRAVY (calculated)
-0.249
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MRDERPPSPA AIYVASSSFS RSPPTIVQQG PPLQTSPADR KMERLRTGFD KFKTEVYDQK PDLFEPLKDN QEPTYLLFAC ADSRVCPSVT LGLEPGEAFT
101: VRNIGAMVPC YCKNKHTGVG SAIEYAVCAL KVKVIVVIGH SRCGGIKALL SLKDGEDDSF HFVEDWVRIG FSAKKKVKDE CCDLPFEDQC AILEKEAVNV
201: SLQNLSTYPF VKEGVANRTL KLVGGHYDFV SGKFDTWEL
101: VRNIGAMVPC YCKNKHTGVG SAIEYAVCAL KVKVIVVIGH SRCGGIKALL SLKDGEDDSF HFVEDWVRIG FSAKKKVKDE CCDLPFEDQC AILEKEAVNV
201: SLQNLSTYPF VKEGVANRTL KLVGGHYDFV SGKFDTWEL
001: MATESYEAAI KGLNDLLSTK ADLGNVAAAK IKALTAELKE LDSSNSDAIE RIKTGFTQFK TEKYLKNSTL FNHLAKTQTP KFLVFACSDS RVCPSHILNF
101: QPGEAFVVRN IANMVPPFDQ KRHSGVGAAV EYAVVHLKVE NILVIGHSCC GGIKGLMSIE DDAAPTQSDF IENWVKIGAS ARNKIKEEHK DLSYDDQCNK
201: CEKEAVNVSL GNLLSYPFVR AEVVKNTLAI RGGHYNFVKG TFDLWELDFK TTPAFAFS
101: QPGEAFVVRN IANMVPPFDQ KRHSGVGAAV EYAVVHLKVE NILVIGHSCC GGIKGLMSIE DDAAPTQSDF IENWVKIGAS ARNKIKEEHK DLSYDDQCNK
201: CEKEAVNVSL GNLLSYPFVR AEVVKNTLAI RGGHYNFVKG TFDLWELDFK TTPAFAFS
Arabidopsis Description
BCA4Beta carbonic anhydrase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CE4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.