Factsheet for VIT_11s0065g00100.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g08460.t01	Wine grape	cytosol	86.01	63.6
VIT_17s0000g08450.t01	Wine grape	cytosol	80.31	59.85
KRH54402	Soybean	cytosol	57.51	42.53
GSMUA_Achr1P13950_001	Banana	cytosol	43.01	41.29
GSMUA_Achr3P31010_001	Banana	cytosol	42.49	40.8
GSMUA_Achr7P26920_001	Banana	cytosol	41.97	40.3
VIT_01s0127g00720.t01	Wine grape	cytosol	53.37	40.23
Solyc02g067750.2.1	Tomato	plastid	52.33	39.61
GSMUA_Achr9P07050_001	Banana	plastid	46.11	34.1
GSMUA_Achr4P14900_001	Banana	plastid	46.63	33.83
GSMUA_Achr6P27350_001	Banana	plasma membrane, plastid	46.63	33.21
TraesCS7B01G354800.1	Wheat	cytosol	34.2	32.67
TraesCS7D01G443400.1	Wheat	cytosol	34.2	32.67
Solyc02g086820.2.1	Tomato	plastid	52.85	31.78
PGSC0003DMT400001297	Potato	cytosol, extracellular, plastid	52.85	31.78
Zm00001d044095_P001	Maize	extracellular	32.64	31.5
PGSC0003DMT400017914	Potato	cytosol	23.32	31.47
TraesCS7D01G443500.1	Wheat	cytosol	32.12	31.31
KXG32976	Sorghum	cytosol	32.64	31.19
VIT_14s0066g01210.t01	Wine grape	plastid	53.89	31.04
KXG32973	Sorghum	cytosol	32.64	30.88
Zm00001d011454_P001	Maize	plastid	37.31	29.39
HORVU3Hr1G057090.2	Barley	plastid	39.38	29.01
TraesCS3B01G259300.1	Wheat	golgi, plastid	38.34	28.68
TraesCS3D01G223300.1	Wheat	plastid	38.34	28.68
TraesCS3A01G230000.2	Wheat	plastid	38.34	28.57
Zm00001d044096_P001	Maize	cytosol	34.72	28.03
TraesCS3A01G230100.1	Wheat	cytosol, plastid	36.27	28.0
TraesCS3D01G223200.1	Wheat	cytosol, plastid	36.27	28.0
Os01t0640000-00	Rice	plastid	34.2	27.85
TraesCS7A01G454500.1	Wheat	cytosol	30.57	27.7
TraesCS3B01G259400.1	Wheat	cytosol, plastid	35.75	27.6
HORVU3Hr1G056990.2	Barley	cytosol, plastid	35.75	27.6
TraesCS7A01G454300.1	Wheat	extracellular, plastid	34.72	27.24
TraesCS7B01G354900.1	Wheat	plastid	33.68	26.64
Os01t0639900-01	Rice	extracellular, nucleus	37.31	26.47
TraesCS7A01G454400.1	Wheat	plastid	32.64	26.36
KXG32978	Sorghum	cytosol, extracellular, plastid	34.2	25.78
VIT_03s0017g00270.t01	Wine grape	plastid	36.27	23.26
VIT_18s0001g07400.t01	Wine grape	plastid	34.72	21.41
VIT_17s0000g08470.t01	Wine grape	plastid	16.58	18.93
HORVU7Hr1G103870.12	Barley	cytosol, plastid	35.75	18.8
KXG32970	Sorghum	cytosol	36.27	15.62
Zm00001d044099_P002	Maize	plastid	36.27	15.49

Protein Annotations

KEGG:00910+4.2.1.1	EntrezGene:100243266	wikigene:100243266	Gene3D:3.40.1050.10	MapMan:35.1	ProteinID:CCB48904
ProteinID:CCB48904.1	InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS	InterPro:Carbonic_anhydrase_sf	ncoils:Coil	UniProt:F6H9N5
EMBL:FN595502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004089	GO:GO:0005488	GO:GO:0008150
GO:GO:0008270	GO:GO:0015976	GO:GO:0016829	InterPro:IPR036874	EntrezGene:LOC100243266	wikigene:LOC100243266
PFAM:PF00484	ScanProsite:PS00704	PANTHER:PTHR11002	PANTHER:PTHR11002:SF27	SMART:SM00947	SUPFAM:SSF53056
UniParc:UPI000210818D	ArrayExpress:VIT_11s0065g00100	EnsemblPlantsGene:VIT_11s0065g00100	EnsemblPlants:VIT_11s0065g00100.t01	RefSeq:XP_002268175	RefSeq:XP_002268175.1
RefSeq:XP_002268175.2	:	:	:	:	:

Description

Carbonic anhydrase [Source:UniProtKB/TrEMBL;Acc:F6H9N5]

Coordinates

chr11:+:13298230..13298823

Molecular Weight (calculated)

21749.8 Da

IEP (calculated)

5.327

GRAVY (calculated)

-0.366

Length

193 amino acids

Sequence
(BLAST)

001: MDMATSSSDV AIEGLRPLLS DKEGLDDIAT EKIEKLTAKL QEQEQDHKEC DPFERIKDGF IHFKIHYFGK YLDYYKQLAE GQHPKFLVFA CSDSRVSPSH
101: VLNFRPGKAF TCRNVANSVP AFNQLRYSGV GAVIEYAVKY LEVENILIIR HSRCGGTEAL MSLPADGTTS NDFIDDWVKI ALPARQDERD MAA

Best Arabidopsis Sequence Match ( AT5G14740.6 )
(BLAST)

001: MGNESYEDAI EALKKLLIEK DDLKDVAAAK VKKITAELQA ASSSDSKSFD PVERIKEGFV TFKKEKYETN PALYGELAKG QSPKYMVFAC SDSRVCPSHV
101: LDFHPGDAFV VRNIANMVPP FDKVKYAGVG AAIEYAVLHL KVENIVVIGH SACGGIKGLM SFPLDGNNST DFIEDWVKIC LPAKSKVLAE SESSAFEDQC
201: GRCEREAVNV SLANLLTYPF VREGVVKGTL ALKGGYYDFV NGSFELWELQ FGISPVHSI

Arabidopsis Description

BCA2Beta carbonic anhydrase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P42737]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.