CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92927
EER94525
EER94961
EER99083
EER99085
EER99354
EER99617
EER99796
EES00597
EES01418
EES03003
EES03536
EES03615
EES05275
EES06013
EES06863
EES07043
EES12301
EES13880
EES14275
EES15199
EES17794
EES18401
EES18559
KXG19687
KXG21447
KXG22309
KXG22420
KXG30817
KXG36814
KXG37457
KXG38809
OQU75662
OQU77683
OQU77742
OQU78269
OQU86913
OQU89126
OQU89974
OQU91338
OQU91808
OQU92761

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G14740.1	EER99796	AT1G19580.1	18189341
AT5G14740.1	EES00597	AT1G19580.1	18189341
AT5G14740.1	KXG21447	AT1G68680.1	18189341
AT5G14740.1	KXG22420	AT1G76200.1	18189341
AT5G14740.1	KXG37457	AT1G79010.1	18189341
AT5G14740.1	EER92927	AT2G02050.1	18189341
AT5G14740.1	EES05275	AT2G02510.1	18189341
AT5G14740.1	EES06013	AT2G20360.1	18189341
AT5G14740.1	EES01418	AT2G31490.1	18189341
AT5G14740.1	EES03615	AT2G31490.1	18189341
AT5G14740.1	OQU91338	AT2G31490.1	18189341
AT5G14740.1	EER99083	AT2G42310.1	18189341
AT5G14740.1	EES14275	AT2G42310.1	18189341
AT5G14740.1	EES15199	AT2G47690.1	18189341
AT5G14740.1	KXG38809	AT3G03100.1	18189341
AT5G14740.1	OQU92761	AT3G06310.1	18189341
AT5G14740.1	EES18401	AT3G08610.1	18189341
AT5G14740.1	EES03003	AT3G12260.1	18189341
AT5G14740.1	EES06863	AT3G48680.1	18189341
AT5G14740.1	EER99085	AT3G57790.1	18189341
AT5G14740.1	EER99354	AT4G00585.1	18189341
AT5G14740.1	KXG22309	AT4G02580.1	18189341
AT5G14740.1	EES13880	AT4G16450.1	18189341
AT5G14740.1	OQU89974	AT4G20150.1	18189341
AT5G14740.1	KXG36814	AT5G08530.1	18189341
AT5G14740.1	EES03536	AT5G11770.1	18189341
AT5G14740.1	EES18559	AT5G11770.1	18189341
AT5G14740.1	EES07043	AT5G40770.1	18189341
AT5G14740.1	EES12301	AT5G40770.1	18189341
AT5G14740.1	OQU78269	AT5G42980.1	15352244
AT5G14740.1	EER94525	AT5G47570.1	18189341
AT5G14740.1	OQU77683	AT5G47570.1	18189341
AT5G14740.1	EES17794	AT5G47890.1	18189341
AT5G14740.1	EER94961	AT5G52840.1	18189341
AT5G14740.1	EER99617	AT5G67590.1	18189341
AT5G14740.1	KXG19687	ATMG00270.1	18189341
AT5G14740.1	OQU75662	ATMG00270.1	18189341
AT5G14740.1	OQU77742	ATMG00270.1	18189341
AT5G14740.1	OQU89126	ATMG00285.1	18189341
AT5G14740.1	OQU91808	ATMG00510.1	18189341
AT5G14740.1	KXG30817	ATMG00513.1	18189341
AT5G14740.1	OQU86913	ATMG00580.1	18189341

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32976	Sorghum	cytosol	82.35	83.17
TraesCS7B01G354800.1	Wheat	cytosol	78.43	79.21
TraesCS7D01G443400.1	Wheat	cytosol	77.45	78.22
Zm00001d044096_P001	Maize	cytosol	90.69	77.41
TraesCS7D01G443500.1	Wheat	cytosol	74.51	76.77
Zm00001d011454_P001	Maize	plastid	88.73	73.88
TraesCS7A01G454500.1	Wheat	cytosol	68.63	65.73
TraesCS7A01G454300.1	Wheat	extracellular, plastid	77.94	64.63
TraesCS7A01G454400.1	Wheat	plastid	75.0	64.02
TraesCS3D01G223300.1	Wheat	plastid	79.9	63.18
TraesCS3A01G230000.2	Wheat	plastid	79.9	62.93
TraesCS3B01G259300.1	Wheat	golgi, plastid	79.41	62.79
TraesCS7B01G354900.1	Wheat	plastid	75.0	62.7
HORVU3Hr1G057090.2	Barley	plastid	80.39	62.6
GSMUA_Achr3P31010_001	Banana	cytosol	60.29	61.19
Os01t0639900-01	Rice	extracellular, nucleus	80.39	60.29
GSMUA_Achr1P13950_001	Banana	cytosol	59.31	60.2
GSMUA_Achr7P26920_001	Banana	cytosol	58.82	59.7
PGSC0003DMT400017914	Potato	cytosol	37.25	53.15
KXG32978	Sorghum	cytosol, extracellular, plastid	63.24	50.39
CDY64836	Canola	plastid	48.04	48.76
Solyc02g067750.2.1	Tomato	plastid	60.78	48.63
VIT_01s0127g00720.t01	Wine grape	cytosol	60.29	48.05
GSMUA_Achr9P07050_001	Banana	plastid	61.27	47.89
GSMUA_Achr4P14900_001	Banana	plastid	61.27	46.99
KRG99341	Soybean	nucleus	54.41	46.06
CDX91024	Canola	cytosol	58.33	45.95
KRH45667	Soybean	nucleus	58.33	45.95
Bra023485.1-P	Field mustard	cytosol	58.33	45.95
CDX85584	Canola	cytosol	58.33	45.95
GSMUA_Achr6P27350_001	Banana	plasma membrane, plastid	60.29	45.39
Bra007912.1-P	Field mustard	cytosol	57.35	45.35
Bra016223.1-P	Field mustard	cytosol	55.88	44.19
CDY69444	Canola	cytosol	55.88	44.19
HORVU7Hr1G103870.12	Barley	cytosol, plastid	78.92	43.87
PGSC0003DMT400079571	Potato	cytosol	54.9	43.75
CDY61543	Canola	cytosol	53.92	42.47
Bra024615.1-P	Field mustard	cytosol	53.92	42.47
KRH74596	Soybean	nucleus	57.84	42.45
KRH69565	Soybean	nucleus	57.84	42.45
Bra012384.1-P	Field mustard	cytosol	53.43	42.25
Solyc05g005490.2.1	Tomato	plastid	55.39	42.16
CDY25799	Canola	cytosol	53.43	42.08
CDY03752	Canola	cytosol	57.35	41.79
CDY57304	Canola	cytosol	57.35	41.79
CDY47630	Canola	cytosol	48.04	41.7
Bra018698.1-P	Field mustard	cytosol	52.94	41.7
CDY28477	Canola	cytosol	52.94	41.7
AT1G70410.2	Thale cress	cytosol	56.37	41.07
CDX93637	Canola	cytosol	45.1	41.07
CDY64834	Canola	cytosol	51.96	40.93
CDY57847	Canola	plastid	55.88	40.71
KXG32970	Sorghum	cytosol	89.22	40.62
AT1G23730.2	Thale cress	cytosol	50.98	40.31
Bra018699.1-P	Field mustard	cytosol	44.61	40.27
CDX93638	Canola	cytosol	44.61	40.27
KRH54402	Soybean	cytosol	51.47	40.23
Zm00001d044099_P002	Maize	plastid	88.73	40.04
VIT_17s0000g08450.t01	Wine grape	cytosol	50.49	39.77
VIT_17s0000g08460.t01	Wine grape	cytosol	49.02	38.31
PGSC0003DMT400001297	Potato	cytosol, extracellular, plastid	59.31	37.69
Solyc02g086820.2.1	Tomato	plastid	59.31	37.69
VIT_14s0066g01210.t01	Wine grape	plastid	59.31	36.12
AT5G14740.1	Thale cress	plastid	58.33	35.95
Bra040520.1-P	Field mustard	plastid	58.33	35.74
Bra039113.1-P	Field mustard	plastid	57.84	35.33
KRG93289	Soybean	nucleus, plastid	58.33	34.9
KRH56601	Soybean	plastid	57.84	34.81
CDY28672	Canola	plastid	58.33	34.59
AT3G01500.2	Thale cress	plastid	58.33	34.29
VIT_11s0065g00100.t01	Wine grape	cytosol	30.88	32.64
CDY37516	Canola	plastid	51.96	30.72
VIT_17s0000g08470.t01	Wine grape	plastid	24.51	29.59
CDY49059	Canola	plastid	51.96	27.82
OQU89631	Sorghum	plastid	42.16	17.55

Protein Annotations

KEGG:00910+4.2.1.1	Gene3D:3.40.1050.10	MapMan:35.1	UniProt:A0A1B6Q4Y1	InterPro:Carbonic_anhydrase	InterPro:Carbonic_anhydrase_CS
InterPro:Carbonic_anhydrase_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004089	GO:GO:0005488	GO:GO:0008150
GO:GO:0008270	GO:GO:0015976	GO:GO:0016829	InterPro:IPR036874	EnsemblPlants:KXG32973	ProteinID:KXG32973
ProteinID:KXG32973.1	PFAM:PF00484	ScanProsite:PS00704	ScanProsite:PS00705	PANTHER:PTHR11002	PANTHER:PTHR11002:SF24
MetaCyc:PWY-241	MetaCyc:PWY-6142	MetaCyc:PWY-7115	MetaCyc:PWY-7117	SMART:SM00947	EnsemblPlantsGene:SORBI_3003G234400
SUPFAM:SSF53056	UniParc:UPI0001FCDBB8	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:57311562..57316959

Molecular Weight (calculated)

22420.0 Da

IEP (calculated)

7.368

GRAVY (calculated)

-0.039

Length

204 amino acids

Sequence
(BLAST)

001: MADAVDRLKT GFNKFKTEVY DKKPELFEPL KAGQSPKYMV FACSDSRVCP SVTLGLQPGE AFTVRNIAAM VPAYDKTKYT GIGSAIEYAV CALKVQVLVV
101: IGHSCCGGIR ALLSLQDGAP DTFHFVEDWV RIGFPAKIKV KKEHASVPFD DQCSILEKEA VNVSLDNLKT YPFVKEGLAN GTLRLVGGHY NFVSGEFDTW
201: EIKS

Best Arabidopsis Sequence Match ( AT1G70410.3 )
(BLAST)

001: MATESYEAAI KGLNDLLSTK ADLGNVAAAK IKALTAELKE LDSSNSDAIE RIKTGFTQFK TEKYLKNSTL FNHLAKTQTP KFLVFACSDS RVCPSHILNF
101: QPGEAFVVRN IANMVPPFDQ KRHSGVGAAV EYAVVHLKVE NILVIGHSCC GGIKGLMSIE DDAAPTQSDF IENWVKIGAS ARNKIKEEHK DLSYDDQCNK
201: CEKEAVNVSL GNLLSYPFVR AEVVKNTLAI RGGHYNFVKG TFDLWELDFK TTPAFAFS

Arabidopsis Description

BCA4Beta carbonic anhydrase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CE4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.