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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 6
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d047119_P001 Maize mitochondrion 41.4 59.09
EER94525 Sorghum mitochondrion 42.68 54.03
VIT_02s0154g00330.t01 Wine grape cytosol 31.21 52.69
TraesCS1D01G213000.1 Wheat mitochondrion 40.76 51.2
TraesCS1B01G223600.1 Wheat mitochondrion 40.76 51.2
TraesCS1A01G209600.1 Wheat mitochondrion 40.76 51.2
GSMUA_Achr5P13340_001 Banana mitochondrion 36.31 45.6
HORVU1Hr1G053600.6 Barley mitochondrion 40.13 45.32
CDY41058 Canola mitochondrion 35.67 44.8
CDY17725 Canola mitochondrion 35.67 44.8
CDX77778 Canola mitochondrion 35.67 44.8
Bra024933.1-P Field mustard mitochondrion 35.67 44.8
CDY40556 Canola mitochondrion 35.03 44.0
CDY28920 Canola mitochondrion 34.39 43.2
AT5G47570.1 Thale cress mitochondrion 34.39 43.2
KRH57381 Soybean mitochondrion 34.39 43.2
Solyc08g078860.2.1 Tomato plastid 34.39 43.2
PGSC0003DMT400012096 Potato mitochondrion 33.76 43.09
KRH04108 Soybean mitochondrion 33.76 42.4
Bra017476.1-P Field mustard mitochondrion 35.03 41.04
PGSC0003DMT400012230 Potato mitochondrion 33.76 34.87
Bra022143.1-P Field mustard mitochondrion 20.38 34.41
GSMUA_Achr1P01460_001 Banana mitochondrion, plastid 21.66 29.31
Protein Annotations
EnsemblPlants:OQU77683EnsemblPlantsGene:SORBI_3009G086900InterPro:Put_Complex_I_su8PANTHER:PTHR36401ProteinID:OQU77683ProteinID:OQU77683.1
SEG:segUniParc:UPI000B8B979FUniProt:A0A1Z5R1N1MapMan:2.4.1.4.2.4::
Description
hypothetical protein
Coordinates
chr9:-:14791793..14794934
Molecular Weight (calculated)
17046.3 Da
IEP (calculated)
6.887
GRAVY (calculated)
-0.249
Length
157 amino acids
Sequence
(BLAST)
001: MGKICVVRYR SFSPCPATEW KSAALSASMH APPCCPPVGS DGRCSHAMVE FAHRSESPME SSASSQRGLF QSGTRRIWEE FKKEEELPVN DELLWDNGTP
101: FPEPCIDRLA PHIGKYEALA WLCRGLGFFA ALGVAAAVND KASKIPYGLQ GTNSAGL
Best Arabidopsis Sequence Match ( AT5G47570.1 )
(BLAST)
001: MAGRLSGVAS RIMGGNGVVA RSVGSSLRQR AGMGLPVGKH IVPDKPLSVN DELMWDNGTA FPEPCIDRIA DTVGKYEALA WLSGGLGFFV GLGLLAVLND
101: KASKVPFTPR VYPYDNLRVE LGGEP
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK0]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.