Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 6
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0154g00330.t01 | Wine grape | cytosol | 64.0 | 86.02 |
| KRH57381 | Soybean | mitochondrion | 84.0 | 84.0 |
| KRH04108 | Soybean | mitochondrion | 84.0 | 84.0 |
| Solyc08g078860.2.1 | Tomato | plastid | 82.4 | 82.4 |
| CDX77778 | Canola | mitochondrion | 82.4 | 82.4 |
| CDY40556 | Canola | mitochondrion | 82.4 | 82.4 |
| Bra022143.1-P | Field mustard | mitochondrion | 60.8 | 81.72 |
| CDY17725 | Canola | mitochondrion | 81.6 | 81.6 |
| CDY28920 | Canola | mitochondrion | 81.6 | 81.6 |
| CDY41058 | Canola | mitochondrion | 81.6 | 81.6 |
| Bra024933.1-P | Field mustard | mitochondrion | 80.8 | 80.8 |
| AT5G47570.1 | Thale cress | mitochondrion | 80.0 | 80.0 |
| TraesCS1D01G213000.1 | Wheat | mitochondrion | 75.2 | 75.2 |
| TraesCS1A01G209600.1 | Wheat | mitochondrion | 75.2 | 75.2 |
| TraesCS1B01G223600.1 | Wheat | mitochondrion | 74.4 | 74.4 |
| EER94525 | Sorghum | mitochondrion | 73.6 | 74.19 |
| Os10t0551600-01 | Rice | mitochondrion | 73.6 | 73.6 |
| Zm00001d047119_P001 | Maize | mitochondrion | 63.2 | 71.82 |
| Zm00001d029856_P001 | Maize | mitochondrion | 71.2 | 71.2 |
| PGSC0003DMT400012096 | Potato | mitochondrion | 68.8 | 69.92 |
| Bra017476.1-P | Field mustard | mitochondrion | 68.0 | 63.43 |
| HORVU1Hr1G053600.6 | Barley | mitochondrion | 68.0 | 61.15 |
| PGSC0003DMT400012230 | Potato | mitochondrion | 72.0 | 59.21 |
| GSMUA_Achr1P01460_001 | Banana | mitochondrion, plastid | 49.6 | 53.45 |
| OQU77683 | Sorghum | mitochondrion | 45.6 | 36.31 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P13340_001 | EnsemblPlants:GSMUA_Achr5T13340_001 | EnsemblPlantsGene:GSMUA_Achr5G13340_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:Put_Complex_I_su8 | PANTHER:PTHR36401 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00029608F9 | UniProt:M0SY63 |
| MapMan:2.4.1.4.2.4 | : | : | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G13340_001]
Coordinates
chr5:-:9553723..9557604
Molecular Weight (calculated)
13251.0 Da
IEP (calculated)
8.713
GRAVY (calculated)
-0.012
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRLSGVAS RIMGGNGVAA RSAASALRSR SGMGFPLGKH IVPDKPLPAD HDLLWDNGTP FPEPCIDRIA PTVGKYEALA WLCGGLSFFA SLGLLAVWND
101: KASKIPYAPK VYPYDNLRVE LGGEP
101: KASKIPYAPK VYPYDNLRVE LGGEP
001: MAGRLSGVAS RIMGGNGVVA RSVGSSLRQR AGMGLPVGKH IVPDKPLSVN DELMWDNGTA FPEPCIDRIA DTVGKYEALA WLSGGLGFFV GLGLLAVLND
101: KASKVPFTPR VYPYDNLRVE LGGEP
101: KASKVPFTPR VYPYDNLRVE LGGEP
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.