Factsheet for Os10t0551600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 19010998

msms PMID: 19010998 doi

S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar

Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94525	Sorghum	mitochondrion	89.6	90.32
Zm00001d029856_P001	Maize	mitochondrion	88.8	88.8
TraesCS1D01G213000.1	Wheat	mitochondrion	87.2	87.2
TraesCS1A01G209600.1	Wheat	mitochondrion	87.2	87.2
TraesCS1B01G223600.1	Wheat	mitochondrion	86.4	86.4
VIT_02s0154g00330.t01	Wine grape	cytosol	58.4	78.49
GSMUA_Achr5P13340_001	Banana	mitochondrion	73.6	73.6
KRH57381	Soybean	mitochondrion	73.6	73.6
CDY41058	Canola	mitochondrion	72.8	72.8
CDY17725	Canola	mitochondrion	72.8	72.8
Bra024933.1-P	Field mustard	mitochondrion	72.8	72.8
AT5G47570.1	Thale cress	mitochondrion	72.0	72.0
KRH04108	Soybean	mitochondrion	72.0	72.0
CDY28920	Canola	mitochondrion	72.0	72.0
CDX77778	Canola	mitochondrion	72.0	72.0
CDY40556	Canola	mitochondrion	71.2	71.2
Solyc08g078860.2.1	Tomato	plastid	71.2	71.2
Bra022143.1-P	Field mustard	mitochondrion	52.8	70.97
HORVU1Hr1G053600.6	Barley	mitochondrion	76.8	69.06
PGSC0003DMT400012096	Potato	mitochondrion	60.0	60.98
Bra017476.1-P	Field mustard	mitochondrion	61.6	57.46
PGSC0003DMT400012230	Potato	mitochondrion	61.6	50.66
GSMUA_Achr1P01460_001	Banana	mitochondrion, plastid	40.0	43.1

Protein Annotations

MapMan:2.4.1.4.2.4	EntrezGene:4349322	ProteinID:AAG13469.1	ProteinID:AAP54938.1	EMBL:AK062858	ProteinID:BAF27162.1
ProteinID:BAT11963.1	ProteinID:EEE51371.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005747	GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:Os10g0551600	EnsemblPlants:Os10t0551600-01
PANTHER:PTHR36401	InterPro:Put_Complex_I_su8	UniProt:Q9FWN8	TMHMM:TMhelix	UniParc:UPI000009F389	RefSeq:XP_015612948.1
SEG:seg	:	:	:	:	:

Description

Conserved hypothetical protein. (Os10t0551600-01)

Coordinates

chr10:+:21652033..21654992

Molecular Weight (calculated)

13274.0 Da

IEP (calculated)

8.739

GRAVY (calculated)

-0.126

Length

125 amino acids

Sequence
(BLAST)

001: MAGRLTAAGS RVLGGQGAAA RAAVSALRHR AGMGLPVGRH IVPDKPLPTN DELVWDNGTP FPEPCIDRLA PHIGKYEALA WLCGGLGFFA TLGLAATLND
101: KASKIPYTPK VYPFDNLREE LGDRP

Best Arabidopsis Sequence Match ( AT5G47570.1 )
(BLAST)

001: MAGRLSGVAS RIMGGNGVVA RSVGSSLRQR AGMGLPVGKH IVPDKPLSVN DELMWDNGTA FPEPCIDRIA DTVGKYEALA WLSGGLGFFV GLGLLAVLND
101: KASKVPFTPR VYPYDNLRVE LGGEP

Arabidopsis Description

NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.