Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G213000.1 | Wheat | mitochondrion | 79.14 | 88.0 |
| TraesCS1A01G209600.1 | Wheat | mitochondrion | 79.14 | 88.0 |
| Zm00001d047119_P001 | Maize | mitochondrion | 69.06 | 87.27 |
| TraesCS1B01G223600.1 | Wheat | mitochondrion | 78.42 | 87.2 |
| Os10t0551600-01 | Rice | mitochondrion | 69.06 | 76.8 |
| GSMUA_Achr5P13340_001 | Banana | mitochondrion | 61.15 | 68.0 |
| VIT_02s0154g00330.t01 | Wine grape | cytosol | 44.6 | 66.67 |
| CDY40556 | Canola | mitochondrion | 59.71 | 66.4 |
| Bra024933.1-P | Field mustard | mitochondrion | 58.99 | 65.6 |
| CDX77778 | Canola | mitochondrion | 58.99 | 65.6 |
| CDY17725 | Canola | mitochondrion | 58.99 | 65.6 |
| CDY28920 | Canola | mitochondrion | 58.99 | 65.6 |
| CDY41058 | Canola | mitochondrion | 58.99 | 65.6 |
| Solyc08g078860.2.1 | Tomato | plastid | 58.27 | 64.8 |
| KRH04108 | Soybean | mitochondrion | 57.55 | 64.0 |
| KRH57381 | Soybean | mitochondrion | 57.55 | 64.0 |
| PGSC0003DMT400012096 | Potato | mitochondrion | 56.12 | 63.41 |
| AT5G47570.1 | Thale cress | mitochondrion | 56.83 | 63.2 |
| Bra022143.1-P | Field mustard | mitochondrion | 41.01 | 61.29 |
| Bra017476.1-P | Field mustard | mitochondrion | 57.55 | 59.7 |
| PGSC0003DMT400012230 | Potato | mitochondrion | 56.83 | 51.97 |
| GSMUA_Achr1P01460_001 | Banana | mitochondrion, plastid | 34.53 | 41.38 |
| OQU77683 | Sorghum | mitochondrion | 45.32 | 40.13 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G053600.6 | EnsemblPlantsGene:HORVU1Hr1G053600 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005747 | GO:GO:0016020 | GO:GO:0016021 | InterPro:Put_Complex_I_su8 | PANTHER:PTHR36401 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000B4686E1 | UniProt:A0A287FMI9 | MapMan:2.4.1.4.2.4 | : |
Description
No Description!
Coordinates
chrchr1H:-:396320556..396321668
Molecular Weight (calculated)
14835.3 Da
IEP (calculated)
10.481
GRAVY (calculated)
-0.052
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRLTAMGS RIMGGHGAAA RAAASALRNR AGMGLPAGRH IVPDKPLPVN DELVWDNGTP FPEPCVDRLA PHIGKYEALA WLCGGLSFFA ALGLAAVVND
101: KASKMPYVSF QKNSCKKKKD SRQTCRMPLC KNIVAKMVV
101: KASKMPYVSF QKNSCKKKKD SRQTCRMPLC KNIVAKMVV
001: MAGRLSGVAS RIMGGNGVVA RSVGSSLRQR AGMGLPVGKH IVPDKPLSVN DELMWDNGTA FPEPCIDRIA DTVGKYEALA WLSGGLGFFV GLGLLAVLND
101: KASKVPFTPR VYPYDNLRVE LGGEP
101: KASKVPFTPR VYPYDNLRVE LGGEP
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.