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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 5
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
mitochondrion: 29575040
msms PMID: 29575040 doi
WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d029856_P001 Maize mitochondrion 90.0 79.2
TraesCS1D01G213000.1 Wheat mitochondrion 86.36 76.0
TraesCS1A01G209600.1 Wheat mitochondrion 86.36 76.0
TraesCS1B01G223600.1 Wheat mitochondrion 85.45 75.2
HORVU1Hr1G053600.6 Barley mitochondrion 87.27 69.06
CDY40556 Canola mitochondrion 73.64 64.8
VIT_02s0154g00330.t01 Wine grape cytosol 54.55 64.52
CDY28920 Canola mitochondrion 72.73 64.0
CDY41058 Canola mitochondrion 72.73 64.0
CDY17725 Canola mitochondrion 72.73 64.0
CDX77778 Canola mitochondrion 72.73 64.0
Bra024933.1-P Field mustard mitochondrion 72.73 64.0
PGSC0003DMT400012096 Potato mitochondrion 70.91 63.41
GSMUA_Achr5P13340_001 Banana mitochondrion 71.82 63.2
KRH57381 Soybean mitochondrion 71.82 63.2
KRH04108 Soybean mitochondrion 70.91 62.4
AT5G47570.1 Thale cress mitochondrion 70.0 61.6
Solyc08g078860.2.1 Tomato plastid 70.0 61.6
Bra022143.1-P Field mustard mitochondrion 50.91 60.22
Bra017476.1-P Field mustard mitochondrion 71.82 58.96
PGSC0003DMT400012230 Potato mitochondrion 70.0 50.66
OQU77683 Sorghum mitochondrion 59.09 41.4
GSMUA_Achr1P01460_001 Banana mitochondrion, plastid 41.82 39.66
Protein Annotations
EnsemblPlants:Zm00001d047119_P001EnsemblPlants:Zm00001d047119_T001EnsemblPlantsGene:Zm00001d047119GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:Put_Complex_I_su8PANTHER:PTHR36401ProteinID:AQL05640.1SEG:segTMHMM:TMhelixUniParc:UPI000843481A
UniProt:A0A1D6P724MapMan:2.4.1.4.2.4::::
Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8 mitochondrial
Coordinates
chr9:-:119266708..119267377
Molecular Weight (calculated)
11371.8 Da
IEP (calculated)
8.513
GRAVY (calculated)
0.185
Length
110 amino acids
Sequence
(BLAST)
001: MAGRLTAAGS RILGGGGARA AASALRHRAG MGLPVGRHIV PDKPLPVNDE LVWDNGTPFP EPCIDRLAPH IGKYEALAWL CGGLGFFAAL GMAAVVNDKA
101: SNIPYVSAHC
Best Arabidopsis Sequence Match ( AT5G47570.1 )
(BLAST)
001: MAGRLSGVAS RIMGGNGVVA RSVGSSLRQR AGMGLPVGKH IVPDKPLSVN DELMWDNGTA FPEPCIDRIA DTVGKYEALA WLSGGLGFFV GLGLLAVLND
101: KASKVPFTPR VYPYDNLRVE LGGEP
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK0]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.