Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- plastid 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
mitochondrion:
29575040
|
msms PMID:
29575040
doi
Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d029856_P001 | Maize | mitochondrion | 90.0 | 79.2 |
TraesCS1D01G213000.1 | Wheat | mitochondrion | 86.36 | 76.0 |
TraesCS1A01G209600.1 | Wheat | mitochondrion | 86.36 | 76.0 |
TraesCS1B01G223600.1 | Wheat | mitochondrion | 85.45 | 75.2 |
HORVU1Hr1G053600.6 | Barley | mitochondrion | 87.27 | 69.06 |
CDY40556 | Canola | mitochondrion | 73.64 | 64.8 |
VIT_02s0154g00330.t01 | Wine grape | cytosol | 54.55 | 64.52 |
CDY28920 | Canola | mitochondrion | 72.73 | 64.0 |
CDY41058 | Canola | mitochondrion | 72.73 | 64.0 |
CDY17725 | Canola | mitochondrion | 72.73 | 64.0 |
CDX77778 | Canola | mitochondrion | 72.73 | 64.0 |
Bra024933.1-P | Field mustard | mitochondrion | 72.73 | 64.0 |
PGSC0003DMT400012096 | Potato | mitochondrion | 70.91 | 63.41 |
GSMUA_Achr5P13340_001 | Banana | mitochondrion | 71.82 | 63.2 |
KRH57381 | Soybean | mitochondrion | 71.82 | 63.2 |
KRH04108 | Soybean | mitochondrion | 70.91 | 62.4 |
AT5G47570.1 | Thale cress | mitochondrion | 70.0 | 61.6 |
Solyc08g078860.2.1 | Tomato | plastid | 70.0 | 61.6 |
Bra022143.1-P | Field mustard | mitochondrion | 50.91 | 60.22 |
Bra017476.1-P | Field mustard | mitochondrion | 71.82 | 58.96 |
PGSC0003DMT400012230 | Potato | mitochondrion | 70.0 | 50.66 |
OQU77683 | Sorghum | mitochondrion | 59.09 | 41.4 |
GSMUA_Achr1P01460_001 | Banana | mitochondrion, plastid | 41.82 | 39.66 |
Protein Annotations
EnsemblPlants:Zm00001d047119_P001 | EnsemblPlants:Zm00001d047119_T001 | EnsemblPlantsGene:Zm00001d047119 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
InterPro:Put_Complex_I_su8 | PANTHER:PTHR36401 | ProteinID:AQL05640.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000843481A |
UniProt:A0A1D6P724 | MapMan:2.4.1.4.2.4 | : | : | : | : |
Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8 mitochondrial
Coordinates
chr9:-:119266708..119267377
Molecular Weight (calculated)
11371.8 Da
IEP (calculated)
8.513
GRAVY (calculated)
0.185
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRLTAAGS RILGGGGARA AASALRHRAG MGLPVGRHIV PDKPLPVNDE LVWDNGTPFP EPCIDRLAPH IGKYEALAWL CGGLGFFAAL GMAAVVNDKA
101: SNIPYVSAHC
101: SNIPYVSAHC
001: MAGRLSGVAS RIMGGNGVVA RSVGSSLRQR AGMGLPVGKH IVPDKPLSVN DELMWDNGTA FPEPCIDRIA DTVGKYEALA WLSGGLGFFV GLGLLAVLND
101: KASKVPFTPR VYPYDNLRVE LGGEP
101: KASKVPFTPR VYPYDNLRVE LGGEP
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.