Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 5
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022143.1-P | Field mustard | mitochondrion | 72.0 | 96.77 |
| CDY17725 | Canola | mitochondrion | 94.4 | 94.4 |
| CDY41058 | Canola | mitochondrion | 94.4 | 94.4 |
| Bra024933.1-P | Field mustard | mitochondrion | 93.6 | 93.6 |
| CDX77778 | Canola | mitochondrion | 93.6 | 93.6 |
| CDY28920 | Canola | mitochondrion | 93.6 | 93.6 |
| CDY40556 | Canola | mitochondrion | 92.8 | 92.8 |
| Solyc08g078860.2.1 | Tomato | plastid | 87.2 | 87.2 |
| VIT_02s0154g00330.t01 | Wine grape | cytosol | 64.8 | 87.1 |
| KRH57381 | Soybean | mitochondrion | 84.0 | 84.0 |
| KRH04108 | Soybean | mitochondrion | 83.2 | 83.2 |
| GSMUA_Achr5P13340_001 | Banana | mitochondrion | 80.0 | 80.0 |
| PGSC0003DMT400012096 | Potato | mitochondrion | 74.4 | 75.61 |
| Bra017476.1-P | Field mustard | mitochondrion | 80.0 | 74.63 |
| EER94525 | Sorghum | mitochondrion | 72.0 | 72.58 |
| Os10t0551600-01 | Rice | mitochondrion | 72.0 | 72.0 |
| TraesCS1B01G223600.1 | Wheat | mitochondrion | 72.0 | 72.0 |
| TraesCS1A01G209600.1 | Wheat | mitochondrion | 71.2 | 71.2 |
| TraesCS1D01G213000.1 | Wheat | mitochondrion | 71.2 | 71.2 |
| Zm00001d047119_P001 | Maize | mitochondrion | 61.6 | 70.0 |
| Zm00001d029856_P001 | Maize | mitochondrion | 69.6 | 69.6 |
| PGSC0003DMT400012230 | Potato | mitochondrion | 76.0 | 62.5 |
| HORVU1Hr1G053600.6 | Barley | mitochondrion | 63.2 | 56.83 |
| GSMUA_Achr1P01460_001 | Banana | mitochondrion, plastid | 42.4 | 45.69 |
| OQU77683 | Sorghum | mitochondrion | 43.2 | 34.39 |
Protein Annotations
| MapMan:2.4.1.4.2.4 | EntrezGene:834807 | UniProt:A0A178UG56 | ProteinID:AED95533.1 | EMBL:AF462836 | ArrayExpress:AT5G47570 |
| EnsemblPlantsGene:AT5G47570 | RefSeq:AT5G47570 | TAIR:AT5G47570 | RefSeq:AT5G47570-TAIR-G | EnsemblPlants:AT5G47570.1 | TAIR:AT5G47570.1 |
| EMBL:AY084983 | EMBL:AY097354 | ProteinID:BAB09083.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005743 | GO:GO:0005747 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055114 | GO:GO:0070469 | RefSeq:NP_568684.1 | ProteinID:OAO92788.1 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR36401 | InterPro:Put_Complex_I_su8 |
| UniProt:Q9FGK0 | TMHMM:TMhelix | UniParc:UPI00000A7CCC | SEG:seg | : | : |
Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK0]
Coordinates
chr5:-:19292587..19294800
Molecular Weight (calculated)
13212.1 Da
IEP (calculated)
8.477
GRAVY (calculated)
0.061
Length
125 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRLSGVAS RIMGGNGVVA RSVGSSLRQR AGMGLPVGKH IVPDKPLSVN DELMWDNGTA FPEPCIDRIA DTVGKYEALA WLSGGLGFFV GLGLLAVLND
101: KASKVPFTPR VYPYDNLRVE LGGEP
101: KASKVPFTPR VYPYDNLRVE LGGEP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.