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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 4
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
 mitochondrion: 27780359
msms PMID: 27780359 doi
G Mustafa, S Komatsu
Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH04108 Soybean mitochondrion 98.4 98.4
VIT_02s0154g00330.t01 Wine grape cytosol 67.2 90.32
CDY17725 Canola mitochondrion 84.8 84.8
CDY41058 Canola mitochondrion 84.8 84.8
Solyc08g078860.2.1 Tomato plastid 84.8 84.8
AT5G47570.1 Thale cress mitochondrion 84.0 84.0
Bra024933.1-P Field mustard mitochondrion 84.0 84.0
CDX77778 Canola mitochondrion 84.0 84.0
CDY28920 Canola mitochondrion 84.0 84.0
CDY40556 Canola mitochondrion 84.0 84.0
GSMUA_Achr5P13340_001 Banana mitochondrion 84.0 84.0
Bra022143.1-P Field mustard mitochondrion 62.4 83.87
EER94525 Sorghum mitochondrion 74.4 75.0
Os10t0551600-01 Rice mitochondrion 73.6 73.6
TraesCS1B01G223600.1 Wheat mitochondrion 72.8 72.8
PGSC0003DMT400012096 Potato mitochondrion 71.2 72.36
Zm00001d029856_P001 Maize mitochondrion 72.0 72.0
TraesCS1D01G213000.1 Wheat mitochondrion 72.0 72.0
TraesCS1A01G209600.1 Wheat mitochondrion 72.0 72.0
Zm00001d047119_P001 Maize mitochondrion 63.2 71.82
Bra017476.1-P Field mustard mitochondrion 70.4 65.67
PGSC0003DMT400012230 Potato mitochondrion 73.6 60.53
HORVU1Hr1G053600.6 Barley mitochondrion 64.0 57.55
GSMUA_Achr1P01460_001 Banana mitochondrion, plastid 40.8 43.97
OQU77683 Sorghum mitochondrion 43.2 34.39
Protein Annotations
EMBL:ACUP02002830EMBL:BT089392EnsemblPlants:KRH57381EnsemblPlantsGene:GLYMA_05G058000EntrezGene:100499749GO:GO:0005575
GO:GO:0016020GO:GO:0016021InterPro:Put_Complex_I_su8PANTHER:PTHR36401ProteinID:KRH57380.1ProteinID:KRH57381
ProteinID:KRH57381.1SEG:segTMHMM:TMhelixUniParc:UPI0001B15A11UniProt:C6SW49MapMan:2.4.1.4.2.4
Description
hypothetical protein
Coordinates
chr5:-:5375093..5377863
Molecular Weight (calculated)
13539.4 Da
IEP (calculated)
8.194
GRAVY (calculated)
-0.022
Length
125 amino acids
Sequence
(BLAST)
001: MAGRLTNAAS RILGGNGVVY RSVASSLRLR SGMGLPVGKH YVPDKPLPMN EELLWDNGTA FPEPCIDRIA DTVGKYEALA WLCGGLSFFA SLGLLAVWND
101: KASKIPFTPK VYPYDNLRVE LGGEP
Best Arabidopsis Sequence Match ( AT5G47570.1 )
(BLAST)
001: MAGRLSGVAS RIMGGNGVVA RSVGSSLRQR AGMGLPVGKH IVPDKPLSVN DELMWDNGTA FPEPCIDRIA DTVGKYEALA WLSGGLGFFV GLGLLAVLND
101: KASKVPFTPR VYPYDNLRVE LGGEP
Arabidopsis Description
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGK0]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.