CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	extracellular, mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011732_P001	Maize	mitochondrion	99.5	99.5
Os01t0720300-00	Rice	mitochondrion	87.0	87.44
TraesCS1A01G353000.1	Wheat	mitochondrion	78.5	80.51
TraesCS1B01G368900.1	Wheat	mitochondrion	80.0	78.82
TraesCS3D01G287400.1	Wheat	mitochondrion	78.5	77.72
EES18559	Sorghum	mitochondrion	78.5	77.72
TraesCS3B01G322300.1	Wheat	golgi	78.5	77.72
TraesCS3A01G287600.1	Wheat	mitochondrion	78.5	77.72
TraesCS1D01G357100.1	Wheat	mitochondrion	79.0	77.07
VIT_04s0008g00830.t01	Wine grape	mitochondrion	75.5	72.25
KRH52179	Soybean	mitochondrion	76.5	71.83
KRH61494	Soybean	mitochondrion	75.5	70.89
CDX69732	Canola	mitochondrion	76.5	70.83
Bra008938.1-P	Field mustard	mitochondrion	76.5	70.83
Bra023341.1-P	Field mustard	mitochondrion	76.5	70.51
CDX70421	Canola	mitochondrion	76.5	70.51
CDX78444	Canola	mitochondrion	76.5	70.51
CDX97144	Canola	mitochondrion	75.5	70.23
Bra006117.1-P	Field mustard	mitochondrion	76.0	70.05
CDY61439	Canola	mitochondrion	75.0	69.77
KRH15514	Soybean	nucleus	72.0	69.57
HORVU3Hr1G068360.4	Barley	cytosol	75.0	69.12
AT5G11770.1	Thale cress	mitochondrion	75.0	68.81
Solyc11g070030.1.1	Tomato	plastid	73.0	68.54
KRH15515	Soybean	mitochondrion	44.0	53.99
EES03029	Sorghum	plastid	31.0	27.31

Protein Annotations

MapMan:2.4.1.2.3	Gene3D:3.40.50.12280	EntrezGene:8069805	UniProt:C5XIC9	EnsemblPlants:EES03536	ProteinID:EES03536
ProteinID:EES03536.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008137	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0051536	GO:GO:0051539
GO:GO:0055114	HAMAP:MF_01356	InterPro:NADH_UQ_OxRdtase_20Kd_su	InterPro:NADH_UbQ_OxRdtase-like_20kDa	PFAM:PF01058	ScanProsite:PS01150
PANTHER:PTHR11995	PANTHER:PTHR11995:SF19	EnsemblPlantsGene:SORBI_3003G279200	SUPFAM:SSF56770	unigene:Sbi.5812	TIGRFAMs:TIGR01957
UniParc:UPI0001A84CFE	RefSeq:XP_002458416.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:61494504..61497259

Molecular Weight (calculated)

21932.7 Da

IEP (calculated)

9.686

GRAVY (calculated)

-0.054

Length

200 amino acids

Sequence
(BLAST)

001: MALLPRTARL ALLSTPRAYS AAAAAGASST SPAPYGGAPP PAMSKTAEFV VSKVDDLMNW ARKGSIWPMT FGLACCAVEM MHAGASRYDF DRFGVIFRPS
101: PRQSDCMIVA GTLTNKMAPA LRKVYDQMPE PRWVISMGSC ANGGGYYHYS YSVVRGCDRI VPVDIYVPGC PPTAEALLYG VLQLQKKINR RKDFLHWWTK

Best Arabidopsis Sequence Match ( AT5G11770.1 )
(BLAST)

001: MAMITRNTAT RLPLLLQSQR AVAAASVSHL HTSLPALSPS TSPTSYTRPG PPSTSPPPPG LSKAAEFVIS KVDDLMNWAR TGSIWPMTFG LACCAVEMMH
101: TGAARYDLDR FGIIFRPSPR QSDCMIVAGT LTNKMAPALR KVYDQMPEPR WVISMGSCAN GGGYYHYSYS VVRGCDRIVP VDIYVPGCPP TAEALLYGLL
201: QLQKKINRRK DFLHWWNK

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42577]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.