Factsheet for TraesCS1D01G357100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P11570_001	Banana	cytosol, mitochondrion, plastid	63.41	98.48
TraesCS1A01G353000.1	Wheat	mitochondrion	91.22	95.9
TraesCS1B01G368900.1	Wheat	mitochondrion	85.85	86.7
TraesCS3D01G287400.1	Wheat	mitochondrion	82.93	84.16
EES18559	Sorghum	mitochondrion	81.46	82.67
Zm00001d011732_P001	Maize	mitochondrion	77.07	79.0
EES03536	Sorghum	mitochondrion	77.07	79.0
Os05t0533700-01	Rice	mitochondrion	77.56	77.94
Os01t0720300-00	Rice	mitochondrion	74.15	76.38
Zm00001d043620_P001	Maize	mitochondrion	48.29	75.0
VIT_04s0008g00830.t01	Wine grape	mitochondrion	74.15	72.73
Bra008938.1-P	Field mustard	mitochondrion	76.59	72.69
CDX69732	Canola	mitochondrion	76.59	72.69
CDX70421	Canola	mitochondrion	76.59	72.35
Solyc11g070030.1.1	Tomato	plastid	75.12	72.3
AT5G11770.1	Thale cress	mitochondrion	76.59	72.02
CDX78444	Canola	mitochondrion	76.1	71.89
KRH52179	Soybean	mitochondrion	74.63	71.83
CDX97144	Canola	mitochondrion	75.12	71.63
KRH15514	Soybean	nucleus	72.2	71.5
Bra006117.1-P	Field mustard	mitochondrion	75.61	71.43
KRH61494	Soybean	mitochondrion	74.15	71.36
CDY61439	Canola	mitochondrion	74.63	71.16
Bra023341.1-P	Field mustard	mitochondrion	75.12	70.97
KRH15515	Soybean	mitochondrion	44.88	56.44
TraesCS5D01G459000.1	Wheat	cytosol, nucleus, plastid	29.76	27.11
TraesCS1D01G181300.1	Wheat	plastid	29.27	26.67
TraesCS2D01G595600.1	Wheat	plastid	28.78	26.46
TraesCS1D01G205100.1	Wheat	cytosol, plastid	28.78	26.22
TraesCS1D01G136200.1	Wheat	cytosol, mitochondrion, nucleus	18.05	25.87
TraesCS5D01G010600.1	Wheat	cytosol, mitochondrion	18.05	25.87
TraesCS1D01G171600.1	Wheat	cytosol	17.56	25.17
TraesCS1D01G169800.1	Wheat	cytosol, extracellular, mitochondrion	13.17	22.31
TraesCS7D01G255200.1	Wheat	cytosol	9.76	17.86

Protein Annotations

MapMan:2.4.1.2.3	Gene3D:3.40.50.12280	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008137
GO:GO:0008150	GO:GO:0008152	GO:GO:0048038	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114
HAMAP:MF_01356	InterPro:NADH_UQ_OxRdtase_20Kd_su	InterPro:NADH_UbQ_OxRdtase-like_20kDa	PFAM:PF01058	ScanProsite:PS01150	PANTHER:PTHR11995
PANTHER:PTHR11995:SF19	SUPFAM:SSF56770	TIGRFAMs:TIGR01957	EnsemblPlantsGene:TraesCS1D01G357100	EnsemblPlants:TraesCS1D01G357100.1	SEG:seg

Description

No Description!

Coordinates

chr1D:+:441205214..441206995

Molecular Weight (calculated)

22232.1 Da

IEP (calculated)

9.542

GRAVY (calculated)

0.028

Length

205 amino acids

Sequence
(BLAST)

001: MALLLPRTAR LALLSAGPRA YSSAVGAAGA GTAAPAPYGG GAPAPASMPK AAEFVVSKVD DLINWARRGS IWPMTFGLAC CAVEMMHAGA ARYDFDRFGV
101: IFRPSPRQSD CMIVAGTLTN KMAPALRKVY DQMPEPRWVI SMGSCANGGG YYHYSYSVVR GCDRIVPVDI YVPGCPPTAE ALLYGVLQLQ KKINRRKDFL
201: HWWEK

Best Arabidopsis Sequence Match ( AT5G11770.1 )
(BLAST)

001: MAMITRNTAT RLPLLLQSQR AVAAASVSHL HTSLPALSPS TSPTSYTRPG PPSTSPPPPG LSKAAEFVIS KVDDLMNWAR TGSIWPMTFG LACCAVEMMH
101: TGAARYDLDR FGIIFRPSPR QSDCMIVAGT LTNKMAPALR KVYDQMPEPR WVISMGSCAN GGGYYHYSYS VVRGCDRIVP VDIYVPGCPP TAEALLYGLL
201: QLQKKINRRK DFLHWWNK

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42577]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.