Factsheet for TraesCS1B01G368900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P11570_001	Banana	cytosol, mitochondrion, plastid	64.04	98.48
TraesCS1D01G357100.1	Wheat	mitochondrion	86.7	85.85
TraesCS1A01G353000.1	Wheat	mitochondrion	80.79	84.1
TraesCS3B01G322300.1	Wheat	golgi	83.25	83.66
EES18559	Sorghum	mitochondrion	82.76	83.17
EES03536	Sorghum	mitochondrion	78.82	80.0
Zm00001d011732_P001	Maize	mitochondrion	78.33	79.5
Os01t0720300-00	Rice	mitochondrion	75.86	77.39
Os05t0533700-01	Rice	mitochondrion	76.85	76.47
VIT_04s0008g00830.t01	Wine grape	mitochondrion	76.35	74.16
AT5G11770.1	Thale cress	mitochondrion	78.33	72.94
Bra008938.1-P	Field mustard	mitochondrion	77.34	72.69
CDX69732	Canola	mitochondrion	77.34	72.69
KRH15514	Soybean	nucleus	73.89	72.46
CDX78444	Canola	mitochondrion	77.34	72.35
CDX70421	Canola	mitochondrion	77.34	72.35
Bra023341.1-P	Field mustard	mitochondrion	77.34	72.35
KRH52179	Soybean	mitochondrion	75.86	72.3
CDY61439	Canola	mitochondrion	76.35	72.09
CDX97144	Canola	mitochondrion	76.35	72.09
Bra006117.1-P	Field mustard	mitochondrion	76.85	71.89
KRH61494	Soybean	mitochondrion	75.37	71.83
Solyc11g070030.1.1	Tomato	plastid	74.38	70.89
Zm00001d043620_P001	Maize	mitochondrion	42.86	65.91
KRH15515	Soybean	mitochondrion	46.8	58.28
TraesCS3B01G185700.1	Wheat	cytosol, mitochondrion, nucleus	18.72	26.57

Protein Annotations

MapMan:2.4.1.2.3	Gene3D:3.40.50.12280	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008137
GO:GO:0008150	GO:GO:0008152	GO:GO:0048038	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114
HAMAP:MF_01356	InterPro:NADH_UQ_OxRdtase_20Kd_su	InterPro:NADH_UbQ_OxRdtase-like_20kDa	PFAM:PF01058	ScanProsite:PS01150	PANTHER:PTHR11995
PANTHER:PTHR11995:SF19	SUPFAM:SSF56770	TIGRFAMs:TIGR01957	EnsemblPlantsGene:TraesCS1B01G368900	EnsemblPlants:TraesCS1B01G368900.1	SEG:seg

Description

No Description!

Coordinates

chr1B:+:599221954..599223599

Molecular Weight (calculated)

22162.1 Da

IEP (calculated)

9.542

GRAVY (calculated)

-0.008

Length

203 amino acids

Sequence
(BLAST)

001: MALLLPRTAR LALLSAGPRA YSSTVGAAGT AAPAPYGGGA PAPAPMPKAA EFVVSKVDDL MNWARRGSIW PMTFGLACCA VEMMHAGAAR YDFDRFGVIF
101: RPSPRQSDCM IVAGTLTNKM APALRKVYDQ MPEPRWVISM GSCANGGGYY HYSYSVVRGC DRIVPVDIYV PGCPPTAEAL LYGVLQLQKK INRRKDFLHW
201: WEK

Best Arabidopsis Sequence Match ( AT5G11770.1 )
(BLAST)

001: MAMITRNTAT RLPLLLQSQR AVAAASVSHL HTSLPALSPS TSPTSYTRPG PPSTSPPPPG LSKAAEFVIS KVDDLMNWAR TGSIWPMTFG LACCAVEMMH
101: TGAARYDLDR FGIIFRPSPR QSDCMIVAGT LTNKMAPALR KVYDQMPEPR WVISMGSCAN GGGYYHYSYS VVRGCDRIVP VDIYVPGCPP TAEALLYGLL
201: QLQKKINRRK DFLHWWNK

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42577]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.