Factsheet for TraesCS3B01G185700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

mitochondrion 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G265100.1	Wheat	cytosol, mitochondrion, nucleus	98.6	98.6
TraesCS4A01G152200.1	Wheat	cytosol, mitochondrion, nucleus	96.5	96.5
TraesCS1D01G136200.1	Wheat	cytosol, mitochondrion, nucleus	96.5	96.5
HORVU0Hr1G032810.1	Barley	cytosol	57.34	96.47
TraesCS5D01G010600.1	Wheat	cytosol, mitochondrion	95.8	95.8
TraesCS1D01G171600.1	Wheat	cytosol	94.41	94.41
CDY15330	Canola	cytosol, extracellular, mitochondrion	37.76	75.0
KRH41779	Soybean	cytosol, mitochondrion, nucleus	34.27	72.06
HORVU0Hr1G036360.3	Barley	cytosol, nucleus, plastid	97.2	61.78
HORVU4Hr1G045220.1	Barley	cytosol, nucleus, plastid	97.2	61.78
HORVU6Hr1G049240.1	Barley	cytosol, nucleus, plastid	97.2	61.78
HORVU5Hr1G064680.1	Barley	plastid	96.5	61.33
AGP50759	Barley	plastid	97.2	56.73
HORVU7Hr1G051200.1	Barley	cytosol	88.81	56.19
Solyc06g036210.1.1	Tomato	mitochondrion	43.36	53.45
Solyc01g007300.1.1	Tomato	nucleus	81.12	51.56
CDY38703	Canola	mitochondrion, nucleus, plasma membrane, plastid	80.42	51.11
CDX99948	Canola	mitochondrion, nucleus, plasma membrane, plastid	80.42	51.11
CDX98581	Canola	mitochondrion, nucleus, plasma membrane, plastid	80.42	51.11
ATCG00430.1	Thale cress	cytosol, mitochondrion, nucleus	79.72	50.67
PGSC0003DMT400017976	Potato	plastid	72.73	49.06
HORVU0Hr1G036850.1	Barley	cytosol, extracellular, plastid	58.74	47.19
TraesCS3B01G322300.1	Wheat	golgi	26.57	18.81
TraesCS1B01G368900.1	Wheat	mitochondrion	26.57	18.72

Protein Annotations

Gene3D:3.40.50.12280	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152
GO:GO:0009507	GO:GO:0009536	GO:GO:0048038	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114
InterPro:NADH_UQ_OxRdtase_20Kd_su	InterPro:NADH_UbQ_OxRdtase-like_20kDa	PFAM:PF01058	ScanProsite:PS01150	PANTHER:PTHR11995	PANTHER:PTHR11995:SF21
SUPFAM:SSF56770	EnsemblPlantsGene:TraesCS3B01G185700	EnsemblPlants:TraesCS3B01G185700.1	:	:	:

Description

No Description!

Coordinates

chr3B:-:201491959..201492390

Molecular Weight (calculated)

16149.6 Da

IEP (calculated)

9.539

GRAVY (calculated)

-0.368

Length

143 amino acids

Sequence
(BLAST)

001: MKMAPSLVRL YEQMPEPKYV IAMGACTITG GMFSTDSYST IRGVDKLIPV DVYLPGCPPK PEAVIDALTK LRKKISREIV EDRTLSQNKN RCFTTSHKLY
101: VRRSTHTGTY EQELLYQSPS TLDISSETFF KSKSSVPSYK LVN

Best Arabidopsis Sequence Match ( ATCG00430.1 )
(BLAST)

001: MNSIKFPILD RTTKNSVIST TLNDLSNWSR LSSLWPLLYG TSCCFIEFAS LIGSRFDFDR YGLVPRSSPR QADLILTAGT VTMKMAPSLV RLYEQMPEPK
101: YVIAMGACTI TGGMFSTDSY STVRGVDKLI PVDVYLPGCP PKPEAVIDAI TKLRKKIARE IYKDRIRPQQ GNRCFTTNHK FFVVRSPHIG NYDQELLYPP
201: SSTSEISTET FFKYKSPVSS HELVN

Arabidopsis Description

NDHKNAD(P)H-quinone oxidoreductase subunit K, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4U5]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.