CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, mitochondrion

Predictor Summary:

extracellular 2
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41779	Soybean	cytosol, mitochondrion, nucleus	65.28	69.12
HORVU0Hr1G032810.1	Barley	cytosol	76.39	64.71
TraesCS1D01G169800.1	Wheat	cytosol, extracellular, mitochondrion	75.0	44.63
TraesCS7D01G255200.1	Wheat	cytosol	62.5	40.18
TraesCSU01G265100.1	Wheat	cytosol, mitochondrion, nucleus	76.39	38.46
TraesCS3B01G185700.1	Wheat	cytosol, mitochondrion, nucleus	75.0	37.76
TraesCS4A01G152200.1	Wheat	cytosol, mitochondrion, nucleus	72.22	36.36
TraesCS1D01G136200.1	Wheat	cytosol, mitochondrion, nucleus	72.22	36.36
TraesCS5D01G010600.1	Wheat	cytosol, mitochondrion	70.83	35.66
TraesCS1D01G171600.1	Wheat	cytosol	69.44	34.97
Os03t0639233-00	Rice	cytosol	52.78	34.23
Os12t0423484-00	Rice	cytosol	37.5	33.33
HORVU0Hr1G036850.1	Barley	cytosol, extracellular, plastid	76.39	30.9
TraesCS4A01G116600.1	Wheat	cytosol, plastid	36.11	27.66
TraesCS1A01G384500.1	Wheat	plastid	76.39	26.07
PGSC0003DMT400017976	Potato	plastid	76.39	25.94
CDX98581	Canola	mitochondrion, nucleus, plasma membrane, plastid	79.17	25.33
CDX99948	Canola	mitochondrion, nucleus, plasma membrane, plastid	79.17	25.33
CDY38703	Canola	mitochondrion, nucleus, plasma membrane, plastid	79.17	25.33
EES03029	Sorghum	plastid	77.78	24.67
HORVU6Hr1G049240.1	Barley	cytosol, nucleus, plastid	76.39	24.44
HORVU4Hr1G045220.1	Barley	cytosol, nucleus, plastid	76.39	24.44
TraesCS5D01G459000.1	Wheat	cytosol, nucleus, plastid	76.39	24.44
HORVU0Hr1G036360.3	Barley	cytosol, nucleus, plastid	76.39	24.44
Solyc01g007300.1.1	Tomato	nucleus	76.39	24.44
TraesCS1D01G181300.1	Wheat	plastid	76.39	24.44
HORVU7Hr1G051200.1	Barley	cytosol	76.39	24.34
HORVU5Hr1G064680.1	Barley	plastid	75.0	24.0
TraesCS1D01G205100.1	Wheat	cytosol, plastid	73.61	23.56
TraesCS2D01G595600.1	Wheat	plastid	72.22	23.32
AGP50759	Barley	plastid	76.39	22.45
CAA34000	Rice	cytosol, mitochondrion, nucleus	76.39	22.36
GRMZM5G800980_P01	Maize	plastid	77.78	21.96
Solyc06g036210.1.1	Tomato	mitochondrion	30.56	18.97
Os12t0423313-00	Rice	mitochondrion	22.22	17.39
CDY61439	Canola	mitochondrion	36.11	12.09
CDX97144	Canola	mitochondrion	36.11	12.09
CDX69732	Canola	mitochondrion	36.11	12.04
CDX78444	Canola	mitochondrion	36.11	11.98
CDX70421	Canola	mitochondrion	36.11	11.98
HORVU1Hr1G045390.1	Barley	cytosol	9.72	9.09

Protein Annotations

Gene3D:3.40.50.12280	MapMan:35.1	GO:A0A078FLM3	UniProt:A0A078FLM3	EnsemblPlants:CDY15330	ProteinID:CDY15330
ProteinID:CDY15330.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0051536
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00085610001	InterPro:NADH_UbQ_OxRdtase-like_20kDa	PFAM:PF01058	PANTHER:PTHR11995	PANTHER:PTHR11995:SF21
SUPFAM:SSF56770	UniParc:UPI0004EEC754	:	:	:	:

Description

BnaC04g42930DBnaC04g42930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FLM3]

Coordinates

chrLK032054:-:76241..76504

Molecular Weight (calculated)

7757.5 Da

IEP (calculated)

7.253

GRAVY (calculated)

0.131

Length

72 amino acids

Sequence
(BLAST)

1: MGACTITGGM FSTDSYSTVR GVDKLIPLIP VDVYLPGCPP KPEAVIDAIT KLRKKIAREI NDIHLISLSD SN

Best Arabidopsis Sequence Match ( ATCG00430.1 )
(BLAST)

001: MNSIKFPILD RTTKNSVIST TLNDLSNWSR LSSLWPLLYG TSCCFIEFAS LIGSRFDFDR YGLVPRSSPR QADLILTAGT VTMKMAPSLV RLYEQMPEPK
101: YVIAMGACTI TGGMFSTDSY STVRGVDKLI PVDVYLPGCP PKPEAVIDAI TKLRKKIARE IYKDRIRPQQ GNRCFTTNHK FFVVRSPHIG NYDQELLYPP
201: SSTSEISTET FFKYKSPVSS HELVN

Arabidopsis Description

NDHKNAD(P)H-quinone oxidoreductase subunit K, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4U5]
SUBAcon: [cytosol,nucleus,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.