Factsheet for HORVU0Hr1G036360.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G049240.1	Barley	cytosol, nucleus, plastid	100.0	100.0
HORVU4Hr1G045220.1	Barley	cytosol, nucleus, plastid	100.0	100.0
HORVU5Hr1G064680.1	Barley	plastid	98.67	98.67
HORVU0Hr1G032810.1	Barley	cytosol	36.89	97.65
TraesCSU01G265100.1	Wheat	cytosol, mitochondrion, nucleus	61.78	97.2
TraesCS3B01G185700.1	Wheat	cytosol, mitochondrion, nucleus	61.78	97.2
HORVU1Hr1G045390.1	Barley	cytosol	32.89	96.1
TraesCS4A01G152200.1	Wheat	cytosol, mitochondrion, nucleus	60.44	95.1
HORVU0Hr1G036850.1	Barley	cytosol, extracellular, plastid	74.22	93.82
HORVU7Hr1G051200.1	Barley	cytosol	93.78	93.36
AGP50759	Barley	plastid	100.0	91.84
HORVU2Hr1G035340.2	Barley	cytosol, mitochondrion, nucleus	18.67	91.3
PGSC0003DMT400017976	Potato	plastid	80.0	84.91
CDY38703	Canola	mitochondrion, nucleus, plasma membrane, plastid	84.89	84.89
CDX99948	Canola	mitochondrion, nucleus, plasma membrane, plastid	84.89	84.89
CDX98581	Canola	mitochondrion, nucleus, plasma membrane, plastid	84.89	84.89
Solyc01g007300.1.1	Tomato	nucleus	84.44	84.44
ATCG00430.1	Thale cress	cytosol, mitochondrion, nucleus	84.44	84.44
CDY15330	Canola	cytosol, extracellular, mitochondrion	24.44	76.39
KRH41779	Soybean	cytosol, mitochondrion, nucleus	22.22	73.53
Solyc06g036210.1.1	Tomato	mitochondrion	26.67	51.72
HORVU3Hr1G068360.4	Barley	cytosol	27.11	28.11

Protein Annotations

MapMan:1.1.8.1.2.4	Gene3D:3.40.50.12280	EntrezGene:4525142	UniProt:A0A287EBU9	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872
GO:GO:0048038	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114	EnsemblPlantsGene:HORVU0Hr1G036360	EnsemblPlants:HORVU0Hr1G036360.3
HAMAP:MF_01356	InterPro:NADH_UQ_OxRdtase_20Kd_su	InterPro:NADH_UbQ_OxRdtase-like_20kDa	PFAM:PF01058	ScanProsite:PS01150	PANTHER:PTHR11995
PANTHER:PTHR11995:SF21	SUPFAM:SSF56770	TIGRFAMs:TIGR01957	UniParc:UPI000186C926	:	:

Description

No Description!

Coordinates

chrchrUn:+:226243112..226243789

Molecular Weight (calculated)

25229.5 Da

IEP (calculated)

8.902

GRAVY (calculated)

-0.169

Length

225 amino acids

Sequence
(BLAST)

001: MNLIEFPLLD QTSSNSVIST TLNDLSNWSR LSSLWPLLYG TSCCFIEFAS LIGSRFDFDR YGLVPRSSPR QADLILTAGT VTMKMAPSLV RLYEQMPEPK
101: YVIAMGACTI TGGMFSTDSY STVRGVDKLI PVDVYLPGCP PKPEAVIDAL TKLRKKISRE IVEDRTLSQN KKRCFTTSHK LYVRRSTHTG TYEQELLYQS
201: PSTLDISSET FLKSKSPVPS YKLVN

Best Arabidopsis Sequence Match ( ATCG00430.1 )
(BLAST)

001: MNSIKFPILD RTTKNSVIST TLNDLSNWSR LSSLWPLLYG TSCCFIEFAS LIGSRFDFDR YGLVPRSSPR QADLILTAGT VTMKMAPSLV RLYEQMPEPK
101: YVIAMGACTI TGGMFSTDSY STVRGVDKLI PVDVYLPGCP PKPEAVIDAI TKLRKKIARE IYKDRIRPQQ GNRCFTTNHK FFVVRSPHIG NYDQELLYPP
201: SSTSEISTET FFKYKSPVSS HELVN

Arabidopsis Description

NDHKNAD(P)H-quinone oxidoreductase subunit K, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A1B1W4U5]
SUBAcon: [mitochondrion,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.