Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P11570_001 | Banana | cytosol, mitochondrion, plastid | 60.37 | 99.24 |
| TraesCS3A01G287600.1 | Wheat | mitochondrion | 72.35 | 77.72 |
| TraesCS3B01G322300.1 | Wheat | golgi | 72.35 | 77.72 |
| TraesCS3D01G287400.1 | Wheat | mitochondrion | 72.35 | 77.72 |
| EES18559 | Sorghum | mitochondrion | 70.97 | 76.24 |
| Os01t0720300-00 | Rice | mitochondrion | 69.12 | 75.38 |
| Zm00001d011732_P001 | Maize | mitochondrion | 69.12 | 75.0 |
| EES03536 | Sorghum | mitochondrion | 69.12 | 75.0 |
| Os05t0533700-01 | Rice | mitochondrion | 69.59 | 74.02 |
| VIT_04s0008g00830.t01 | Wine grape | mitochondrion | 68.66 | 71.29 |
| KRH52179 | Soybean | mitochondrion | 69.59 | 70.89 |
| KRH61494 | Soybean | mitochondrion | 69.12 | 70.42 |
| CDY61439 | Canola | mitochondrion | 69.12 | 69.77 |
| CDX97144 | Canola | mitochondrion | 69.12 | 69.77 |
| CDX69732 | Canola | mitochondrion | 69.12 | 69.44 |
| Bra008938.1-P | Field mustard | mitochondrion | 69.12 | 69.44 |
| CDX78444 | Canola | mitochondrion | 69.12 | 69.12 |
| CDX70421 | Canola | mitochondrion | 69.12 | 69.12 |
| Bra023341.1-P | Field mustard | mitochondrion | 69.12 | 69.12 |
| KRH15514 | Soybean | nucleus | 65.9 | 69.08 |
| Solyc11g070030.1.1 | Tomato | plastid | 67.74 | 69.01 |
| AT5G11770.1 | Thale cress | mitochondrion | 69.12 | 68.81 |
| Bra006117.1-P | Field mustard | mitochondrion | 68.66 | 68.66 |
| Zm00001d043620_P001 | Maize | mitochondrion | 35.48 | 58.33 |
| KRH15515 | Soybean | mitochondrion | 39.63 | 52.76 |
| HORVU2Hr1G035340.2 | Barley | cytosol, mitochondrion, nucleus | 10.6 | 50.0 |
| HORVU0Hr1G032810.1 | Barley | cytosol | 17.05 | 43.53 |
| HORVU0Hr1G036850.1 | Barley | cytosol, extracellular, plastid | 27.65 | 33.71 |
| HORVU6Hr1G049240.1 | Barley | cytosol, nucleus, plastid | 28.11 | 27.11 |
| HORVU4Hr1G045220.1 | Barley | cytosol, nucleus, plastid | 28.11 | 27.11 |
| HORVU0Hr1G036360.3 | Barley | cytosol, nucleus, plastid | 28.11 | 27.11 |
| HORVU7Hr1G051200.1 | Barley | cytosol | 28.11 | 26.99 |
| HORVU5Hr1G064680.1 | Barley | plastid | 27.65 | 26.67 |
| AGP50759 | Barley | plastid | 28.11 | 24.9 |
| HORVU1Hr1G045390.1 | Barley | cytosol | 1.84 | 5.19 |
Protein Annotations
| MapMan:2.4.1.2.3 | Gene3D:3.40.50.12280 | UniProt:A0A287LHD4 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008137 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0048038 |
| GO:GO:0051536 | GO:GO:0051539 | GO:GO:0055114 | EnsemblPlantsGene:HORVU3Hr1G068360 | EnsemblPlants:HORVU3Hr1G068360.4 | HAMAP:MF_01356 |
| InterPro:NADH_UQ_OxRdtase_20Kd_su | InterPro:NADH_UbQ_OxRdtase-like_20kDa | PFAM:PF01058 | ScanProsite:PS01150 | PANTHER:PTHR11995 | PANTHER:PTHR11995:SF19 |
| SUPFAM:SSF56770 | TIGRFAMs:TIGR01957 | UniParc:UPI000B45FE84 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr3H:-:518352737..518538038
Molecular Weight (calculated)
24278.6 Da
IEP (calculated)
9.068
GRAVY (calculated)
-0.116
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: XXSKAAEFVV SKVDDLMNWA RRGSIWPMTF GLACCAVEMM HAGAARYDFD RFGVIFRPSP RQSDCMIVAG TLTNKMAPAL RKVYDQMPEP RWVISMGSCA
101: NGGGYYHYSY SVVRGCDRIV PVDIYVPGCP PTAEALLYGV LQLQKKINRR KDFLHCCANG GGYYHYSYSV VRGCDRIVPV DIYVPGCPPT AEALLYGVLQ
201: LQKKINRRKD FLHWWTK
101: NGGGYYHYSY SVVRGCDRIV PVDIYVPGCP PTAEALLYGV LQLQKKINRR KDFLHCCANG GGYYHYSYSV VRGCDRIVPV DIYVPGCPPT AEALLYGVLQ
201: LQKKINRRKD FLHWWTK
001: MAMITRNTAT RLPLLLQSQR AVAAASVSHL HTSLPALSPS TSPTSYTRPG PPSTSPPPPG LSKAAEFVIS KVDDLMNWAR TGSIWPMTFG LACCAVEMMH
101: TGAARYDLDR FGIIFRPSPR QSDCMIVAGT LTNKMAPALR KVYDQMPEPR WVISMGSCAN GGGYYHYSYS VVRGCDRIVP VDIYVPGCPP TAEALLYGLL
201: QLQKKINRRK DFLHWWNK
101: TGAARYDLDR FGIIFRPSPR QSDCMIVAGT LTNKMAPALR KVYDQMPEPR WVISMGSCAN GGGYYHYSYS VVRGCDRIVP VDIYVPGCPP TAEALLYGLL
201: QLQKKINRRK DFLHWWNK
Arabidopsis Description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42577]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.