CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P11570_001	Banana	cytosol, mitochondrion, plastid	42.33	52.27
Zm00001d043620_P001	Maize	mitochondrion	40.49	50.0
KRH15514	Soybean	nucleus	62.58	49.28
KRH52179	Soybean	mitochondrion	62.58	47.89
KRH61494	Soybean	mitochondrion	61.96	47.42
TraesCS1B01G368900.1	Wheat	mitochondrion	58.28	46.8
TraesCS1A01G353000.1	Wheat	mitochondrion	55.83	46.67
TraesCS3D01G287400.1	Wheat	mitochondrion	57.06	46.04
TraesCS3B01G322300.1	Wheat	golgi	57.06	46.04
TraesCS3A01G287600.1	Wheat	mitochondrion	57.06	46.04
EES18559	Sorghum	mitochondrion	56.44	45.54
Solyc11g070030.1.1	Tomato	plastid	59.51	45.54
TraesCS1D01G357100.1	Wheat	mitochondrion	56.44	44.88
Os05t0533700-01	Rice	mitochondrion	55.83	44.61
EES03536	Sorghum	mitochondrion	53.99	44.0
Os01t0720300-00	Rice	mitochondrion	53.37	43.72
Zm00001d011732_P001	Maize	mitochondrion	53.37	43.5
HORVU3Hr1G068360.4	Barley	cytosol	52.76	39.63
GSMUA_Achr6P26560_001	Banana	cytoskeleton, mitochondrion, plasma membrane	25.77	23.73
KRH41779	Soybean	cytosol, mitochondrion, nucleus	7.98	19.12

Protein Annotations

EMBL:ACUP02008608	EnsemblPlants:KRH15515	EnsemblPlantsGene:GLYMA_14G093400	Gene3D:3.40.50.12280	GO:GO:0003674	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0051536	GO:GO:0055114	PANTHER:PTHR11995	PANTHER:PTHR11995:SF19
ProteinID:KRH15515	ProteinID:KRH15515.1	SUPFAM:SSF56770	UniParc:UPI0006EDA62A	UniProt:A0A0R0GLD4	MapMan:35.1

Description

hypothetical protein

Coordinates

chr14:-:8675773..8681315

Molecular Weight (calculated)

18257.3 Da

IEP (calculated)

9.248

GRAVY (calculated)

0.028

Length

163 amino acids

Sequence
(BLAST)

001: MALVTRTRPT WCLPRRLLFA SLRSNSTGAT APPSYCAPPS MIANSSPVGH SKPVEFVISK VDSLLNWAHS RSIWPMMFGL AYCDMEMMHT GATYYDLDRF
101: RIIFRPSPHQ SNCMIVAGTL TNKMAHVLRK YYHYSYAVVR GCDRIVPVDI NISGCPPTAE ALL

Best Arabidopsis Sequence Match ( AT5G11770.1 )
(BLAST)

001: MAMITRNTAT RLPLLLQSQR AVAAASVSHL HTSLPALSPS TSPTSYTRPG PPSTSPPPPG LSKAAEFVIS KVDDLMNWAR TGSIWPMTFG LACCAVEMMH
101: TGAARYDLDR FGIIFRPSPR QSDCMIVAGT LTNKMAPALR KVYDQMPEPR WVISMGSCAN GGGYYHYSYS VVRGCDRIVP VDIYVPGCPP TAEALLYGLL
201: QLQKKINRRK DFLHWWNK

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42577]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.