CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	extracellular, mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G368900.1	Wheat	mitochondrion	83.17	82.76
TraesCS1A01G353000.1	Wheat	mitochondrion	79.21	82.05
TraesCS1D01G357100.1	Wheat	mitochondrion	82.67	81.46
TraesCS3B01G322300.1	Wheat	golgi	81.19	81.19
TraesCS3A01G287600.1	Wheat	mitochondrion	81.19	81.19
TraesCS3D01G287400.1	Wheat	mitochondrion	81.19	81.19
EES03536	Sorghum	mitochondrion	77.72	78.5
Zm00001d011732_P001	Maize	mitochondrion	77.72	78.5
Os01t0720300-00	Rice	mitochondrion	77.23	78.39
VIT_04s0008g00830.t01	Wine grape	mitochondrion	75.74	73.21
CDX70421	Canola	mitochondrion	77.72	72.35
KRH52179	Soybean	mitochondrion	75.74	71.83
KRH61494	Soybean	mitochondrion	75.74	71.83
CDX69732	Canola	mitochondrion	76.73	71.76
Bra008938.1-P	Field mustard	mitochondrion	76.73	71.76
CDY61439	Canola	mitochondrion	76.24	71.63
Solyc11g070030.1.1	Tomato	plastid	75.25	71.36
CDX97144	Canola	mitochondrion	75.74	71.16
Bra006117.1-P	Field mustard	mitochondrion	76.24	70.97
HORVU3Hr1G068360.4	Barley	cytosol	76.24	70.97
CDX78444	Canola	mitochondrion	76.24	70.97
Bra023341.1-P	Field mustard	mitochondrion	76.24	70.97
AT5G11770.1	Thale cress	mitochondrion	76.24	70.64
KRH15514	Soybean	nucleus	72.28	70.53
KRH15515	Soybean	mitochondrion	45.54	56.44
EES03029	Sorghum	plastid	31.68	28.19

Protein Annotations

MapMan:2.4.1.2.3	Gene3D:3.40.50.12280	UniProt:C5YUG3	EnsemblPlants:EES18559	ProteinID:EES18559	ProteinID:EES18559.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114
HAMAP:MF_01356	InterPro:NADH_UQ_OxRdtase_20Kd_su	InterPro:NADH_UbQ_OxRdtase-like_20kDa	PFAM:PF01058	ScanProsite:PS01150	PANTHER:PTHR11995
PANTHER:PTHR11995:SF19	EnsemblPlantsGene:SORBI_3009G209400	SUPFAM:SSF56770	TIGRFAMs:TIGR01957	UniParc:UPI0001A88C6A	RefSeq:XP_002440129.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:55623045..55624263

Molecular Weight (calculated)

22222.1 Da

IEP (calculated)

9.846

GRAVY (calculated)

-0.061

Length

202 amino acids

Sequence
(BLAST)

001: MALLPRTARL ALLPASSRAY SSSSAAGSPR PAPYGGAAPL PPALASKAAE FVVSKVDDLM NWARRGSIWP MTFGLACCAV EMMHAGASRY DFDRFGLIFR
101: PSPRQSDCMI VAGTLTNKMA PALRRVYDQM PEPRWVISMG SCANGGGYYH YSYSVVRGCD RIVPVDIYVP GCPPTAEALL YGVLQLQKKI NRRKDFLHWW
201: TK

Best Arabidopsis Sequence Match ( AT5G11770.1 )
(BLAST)

001: MAMITRNTAT RLPLLLQSQR AVAAASVSHL HTSLPALSPS TSPTSYTRPG PPSTSPPPPG LSKAAEFVIS KVDDLMNWAR TGSIWPMTFG LACCAVEMMH
101: TGAARYDLDR FGIIFRPSPR QSDCMIVAGT LTNKMAPALR KVYDQMPEPR WVISMGSCAN GGGYYHYSYS VVRGCDRIVP VDIYVPGCPP TAEALLYGLL
201: QLQKKINRRK DFLHWWNK

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42577]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.