Factsheet for Os01t0720300-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	extracellular, mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011732_P001	Maize	mitochondrion	87.44	87.0
EES03536	Sorghum	mitochondrion	87.44	87.0
Os05t0533700-01	Rice	mitochondrion	87.44	85.29
TraesCS3D01G287400.1	Wheat	mitochondrion	79.4	78.22
TraesCS3B01G322300.1	Wheat	golgi	79.4	78.22
TraesCS3A01G287600.1	Wheat	mitochondrion	79.4	78.22
TraesCS1A01G353000.1	Wheat	mitochondrion	75.88	77.44
EES18559	Sorghum	mitochondrion	78.39	77.23
TraesCS1B01G368900.1	Wheat	mitochondrion	77.39	75.86
TraesCS1D01G357100.1	Wheat	mitochondrion	76.38	74.15
KRH61494	Soybean	mitochondrion	77.39	72.3
VIT_04s0008g00830.t01	Wine grape	mitochondrion	75.88	72.25
KRH52179	Soybean	mitochondrion	76.88	71.83
Bra008938.1-P	Field mustard	mitochondrion	77.89	71.76
CDX69732	Canola	mitochondrion	77.39	71.3
Bra023341.1-P	Field mustard	mitochondrion	77.39	70.97
CDX78444	Canola	mitochondrion	77.39	70.97
CDX70421	Canola	mitochondrion	77.39	70.97
CDX97144	Canola	mitochondrion	76.38	70.7
Bra006117.1-P	Field mustard	mitochondrion	76.88	70.51
CDY61439	Canola	mitochondrion	75.88	70.23
HORVU3Hr1G068360.4	Barley	cytosol	75.38	69.12
AT5G11770.1	Thale cress	mitochondrion	75.38	68.81
KRH15514	Soybean	nucleus	71.36	68.6
Solyc11g070030.1.1	Tomato	plastid	73.37	68.54
KRH15515	Soybean	mitochondrion	43.72	53.37
CAA34000	Rice	cytosol, mitochondrion, nucleus	31.16	25.2
Os12t0423484-00	Rice	cytosol	7.54	18.52
Os03t0639233-00	Rice	cytosol	8.54	15.32
Os12t0423313-00	Rice	mitochondrion	6.03	13.04

Protein Annotations

EntrezGene:107276869	MapMan:2.4.1.2.3	Gene3D:3.40.50.12280	ProteinID:BAB84415.1	ProteinID:BAS74072.1	ProteinID:EEE55308.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114
HAMAP:MF_01356	InterPro:NADH_UQ_OxRdtase_20Kd_su	InterPro:NADH_UbQ_OxRdtase-like_20kDa	EnsemblPlantsGene:Os01g0720300	EnsemblPlants:Os01t0720300-00	PFAM:PF01058
ScanProsite:PS01150	PANTHER:PTHR11995	PANTHER:PTHR11995:SF19	UniProt:Q8W0E8	SUPFAM:SSF56770	TIGRFAMs:TIGR01957
UniParc:UPI000009D582	RefSeq:XP_015648247.1	SEG:seg	:	:	:

Description

NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-20KD) (CI-20KD). (Os01t0720300-00)

Coordinates

chr1:-:30021240..30023716

Molecular Weight (calculated)

21877.7 Da

IEP (calculated)

9.833

GRAVY (calculated)

-0.060

Length

199 amino acids

Sequence
(BLAST)

001: MALLPRTARL ALLSAPRAYS AAATGAGAAP ARYAGAPPPA PQSKAAEFVI SKVDDLMNWA RRGSIWPMTF GLACCAVEMM HAGASRYDFD RFGVIFRPSP
101: RQSDCMIVAG TLTNKMAPAL RKVYDQMPEP RWVISMGSCA NGGGYYHYSY SVVRGCDRIV PVDIYVPGCP PTAEALLYGV LQLQKKINRR KDFLHWWTK

Best Arabidopsis Sequence Match ( AT5G11770.1 )
(BLAST)

001: MAMITRNTAT RLPLLLQSQR AVAAASVSHL HTSLPALSPS TSPTSYTRPG PPSTSPPPPG LSKAAEFVIS KVDDLMNWAR TGSIWPMTFG LACCAVEMMH
101: TGAARYDLDR FGIIFRPSPR QSDCMIVAGT LTNKMAPALR KVYDQMPEPR WVISMGSCAN GGGYYHYSYS VVRGCDRIVP VDIYVPGCPP TAEALLYGLL
201: QLQKKINRRK DFLHWWNK

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42577]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.