Factsheet for Os05t0533700-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	extracellular, mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0720300-00	Rice	mitochondrion	85.29	87.44
TraesCS3D01G287400.1	Wheat	mitochondrion	78.92	79.7
TraesCS3B01G322300.1	Wheat	golgi	78.92	79.7
TraesCS3A01G287600.1	Wheat	mitochondrion	78.92	79.7
TraesCS1A01G353000.1	Wheat	mitochondrion	75.49	78.97
TraesCS1D01G357100.1	Wheat	mitochondrion	77.94	77.56
TraesCS1B01G368900.1	Wheat	mitochondrion	76.47	76.85
VIT_04s0008g00830.t01	Wine grape	mitochondrion	75.49	73.68
Bra008938.1-P	Field mustard	mitochondrion	77.94	73.61
CDY61439	Canola	mitochondrion	77.45	73.49
CDX70421	Canola	mitochondrion	77.94	73.27
KRH52179	Soybean	mitochondrion	76.47	73.24
KRH61494	Soybean	mitochondrion	76.47	73.24
CDX69732	Canola	mitochondrion	77.45	73.15
CDX78444	Canola	mitochondrion	76.96	72.35
Bra023341.1-P	Field mustard	mitochondrion	76.96	72.35
CDX97144	Canola	mitochondrion	75.98	72.09
Bra006117.1-P	Field mustard	mitochondrion	76.47	71.89
AT5G11770.1	Thale cress	mitochondrion	75.49	70.64
HORVU3Hr1G068360.4	Barley	cytosol	74.02	69.59
KRH15514	Soybean	nucleus	70.1	69.08
Solyc11g070030.1.1	Tomato	plastid	71.57	68.54
KRH15515	Soybean	mitochondrion	44.61	55.83
GSMUA_Achr6P26560_001	Banana	cytoskeleton, mitochondrion, plasma membrane	30.88	35.59
CAA34000	Rice	cytosol, mitochondrion, nucleus	30.88	25.61
Os12t0423484-00	Rice	cytosol	7.84	19.75
Os03t0639233-00	Rice	cytosol	8.82	16.22
Os12t0423313-00	Rice	mitochondrion	6.37	14.13

Protein Annotations

MapMan:2.4.1.2.3	Gene3D:3.40.50.12280	EntrezGene:4339427	ProteinID:AAT47086.1	EMBL:AK243655	ProteinID:BAS95057.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0046872	GO:GO:0048038	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114
HAMAP:MF_01356	InterPro:NADH_UQ_OxRdtase_20Kd_su	InterPro:NADH_UbQ_OxRdtase-like_20kDa	EnsemblPlantsGene:Os05g0533700	EnsemblPlants:Os05t0533700-01	PFAM:PF01058
ScanProsite:PS01150	PANTHER:PTHR11995	PANTHER:PTHR11995:SF19	UniProt:Q6I5H0	SUPFAM:SSF56770	TIGRFAMs:TIGR01957
UniParc:UPI00003B0D76	RefSeq:XP_015639009.1	SEG:seg	:	:	:

Description

NADH-ubiquinone oxidoreductase subunit PSST (Fragment). (Os05t0533700-01)

Coordinates

chr5:+:26494551..26497193

Molecular Weight (calculated)

22152.8 Da

IEP (calculated)

9.706

GRAVY (calculated)

-0.070

Length

204 amino acids

Sequence
(BLAST)

001: MALLPRAARL AALSAPRAYS SATAAAAGAG GSASPAPYGG APPPAANSKA AEFVISKVDD LMNWARRGSI WPMTFGLACC AVEMMHTGAS RYDFDRFGVI
101: FRPSPRQSDC MIVAGTLTNK MAPALRKVYD QMPEPRWVIS MGSCANGGGY YHYSYSVVRG CDRIVPVDIY VPGCPPTAEA LLYGVLQLQK KINRRRDFLH
201: WWNK

Best Arabidopsis Sequence Match ( AT5G11770.1 )
(BLAST)

001: MAMITRNTAT RLPLLLQSQR AVAAASVSHL HTSLPALSPS TSPTSYTRPG PPSTSPPPPG LSKAAEFVIS KVDDLMNWAR TGSIWPMTFG LACCAVEMMH
101: TGAARYDLDR FGIIFRPSPR QSDCMIVAGT LTNKMAPALR KVYDQMPEPR WVISMGSCAN GGGYYHYSYS VVRGCDRIVP VDIYVPGCPP TAEALLYGLL
201: QLQKKINRRK DFLHWWNK

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42577]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.