CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61439	Canola	mitochondrion	96.28	96.28
GSMUA_Achr1P11570_001	Banana	cytosol, mitochondrion, plastid	58.6	95.45
CDX69732	Canola	mitochondrion	91.63	91.2
Bra008938.1-P	Field mustard	mitochondrion	91.16	90.74
AT5G11770.1	Thale cress	mitochondrion	89.3	88.07
CDX78444	Canola	mitochondrion	88.84	88.02
CDX70421	Canola	mitochondrion	88.84	88.02
VIT_04s0008g00830.t01	Wine grape	mitochondrion	77.67	79.9
KRH52179	Soybean	mitochondrion	79.07	79.81
KRH61494	Soybean	mitochondrion	78.6	79.34
TraesCS3D01G287400.1	Wheat	mitochondrion	74.42	79.21
TraesCS3B01G322300.1	Wheat	golgi	74.42	79.21
TraesCS3A01G287600.1	Wheat	mitochondrion	74.42	79.21
TraesCS1A01G353000.1	Wheat	mitochondrion	69.3	76.41
Os01t0720300-00	Rice	mitochondrion	70.7	76.38
TraesCS1B01G368900.1	Wheat	mitochondrion	72.09	76.35
Os05t0533700-01	Rice	mitochondrion	72.09	75.98
KRH15514	Soybean	nucleus	73.02	75.85
EES18559	Sorghum	mitochondrion	71.16	75.74
Solyc11g070030.1.1	Tomato	plastid	74.88	75.59
EES03536	Sorghum	mitochondrion	70.23	75.5
TraesCS1D01G357100.1	Wheat	mitochondrion	71.63	75.12
Zm00001d011732_P001	Maize	mitochondrion	69.77	75.0
HORVU3Hr1G068360.4	Barley	cytosol	69.77	69.12
Zm00001d043620_P001	Maize	mitochondrion	38.14	62.12
CDY15330	Canola	cytosol, extracellular, mitochondrion	12.09	36.11
GSMUA_Achr6P26560_001	Banana	cytoskeleton, mitochondrion, plasma membrane	27.91	33.9
CDY38703	Canola	mitochondrion, nucleus, plasma membrane, plastid	27.91	26.67
CDX99948	Canola	mitochondrion, nucleus, plasma membrane, plastid	27.91	26.67
CDX98581	Canola	mitochondrion, nucleus, plasma membrane, plastid	27.91	26.67

Protein Annotations

MapMan:2.4.1.2.3	Gene3D:3.40.50.12280	GO:A0A078E8U7	EnsemblPlants:CDX97144	ProteinID:CDX97144	ProteinID:CDX97144.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008137	GO:GO:0008150	GO:GO:0008152
GO:GO:0048038	GO:GO:0051536	GO:GO:0051539	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00104133001	HAMAP:MF_01356
InterPro:NADH_UQ_OxRdtase_20Kd_su	InterPro:NADH_UbQ_OxRdtase-like_20kDa	PFAM:PF01058	ScanProsite:PS01150	PANTHER:PTHR11995	PANTHER:PTHR11995:SF19
SUPFAM:SSF56770	TIGRFAMs:TIGR01957	UniParc:UPI0004EEACAB	SEG:seg	:	:

Description

BnaC09g44810D

Coordinates

chrLK031897:-:883554..885324

Molecular Weight (calculated)

23870.1 Da

IEP (calculated)

9.882

GRAVY (calculated)

-0.160

Length

215 amino acids

Sequence
(BLAST)

001: MAMITRNTAT RLPLLLQSHR AAAVSHLHTS LPALSPSTTP TSYTRPGPPS TSAPPPGLSK TAEFVISKVD DLMNWARRGS IWPMTFGLAC CAVEMMHTGA
101: ARYDLDRFGI IFRPSPRQSD CMIVAGTLTN KMAPALRKVY DQMPEPRWVI SMGSCANGGG YYHYSYSVVR GCDRIVPVDI YVPGCPPTAE ALLYGLLQLQ
201: KKINRRKDFL HWWNK

Best Arabidopsis Sequence Match ( AT5G11770.1 )
(BLAST)

001: MAMITRNTAT RLPLLLQSQR AVAAASVSHL HTSLPALSPS TSPTSYTRPG PPSTSPPPPG LSKAAEFVIS KVDDLMNWAR TGSIWPMTFG LACCAVEMMH
101: TGAARYDLDR FGIIFRPSPR QSDCMIVAGT LTNKMAPALR KVYDQMPEPR WVISMGSCAN GGGYYHYSYS VVRGCDRIVP VDIYVPGCPP TAEALLYGLL
201: QLQKKINRRK DFLHWWNK

Arabidopsis Description

NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42577]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.