Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- cytosol 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G353000.1 | Wheat | mitochondrion | 98.48 | 66.67 |
| TraesCS3D01G287400.1 | Wheat | mitochondrion | 99.24 | 64.85 |
| TraesCS3B01G322300.1 | Wheat | golgi | 99.24 | 64.85 |
| TraesCS3A01G287600.1 | Wheat | mitochondrion | 99.24 | 64.85 |
| TraesCS1B01G368900.1 | Wheat | mitochondrion | 98.48 | 64.04 |
| TraesCS1D01G357100.1 | Wheat | mitochondrion | 98.48 | 63.41 |
| HORVU3Hr1G068360.4 | Barley | cytosol | 99.24 | 60.37 |
| VIT_04s0008g00830.t01 | Wine grape | mitochondrion | 94.7 | 59.81 |
| KRH15514 | Soybean | nucleus | 93.18 | 59.42 |
| KRH52179 | Soybean | mitochondrion | 95.45 | 59.15 |
| KRH61494 | Soybean | mitochondrion | 94.7 | 58.69 |
| Solyc11g070030.1.1 | Tomato | plastid | 94.7 | 58.69 |
| CDY61439 | Canola | mitochondrion | 95.45 | 58.6 |
| CDX97144 | Canola | mitochondrion | 95.45 | 58.6 |
| CDX69732 | Canola | mitochondrion | 95.45 | 58.33 |
| Bra008938.1-P | Field mustard | mitochondrion | 95.45 | 58.33 |
| CDX78444 | Canola | mitochondrion | 95.45 | 58.06 |
| CDX70421 | Canola | mitochondrion | 95.45 | 58.06 |
| Bra023341.1-P | Field mustard | mitochondrion | 95.45 | 58.06 |
| Bra006117.1-P | Field mustard | mitochondrion | 95.45 | 58.06 |
| AT5G11770.1 | Thale cress | mitochondrion | 95.45 | 57.8 |
| KRH15515 | Soybean | mitochondrion | 52.27 | 42.33 |
| GSMUA_Achr6P26560_001 | Banana | cytoskeleton, mitochondrion, plasma membrane | 45.45 | 33.9 |
Protein Annotations
| MapMan:2.4.1.2.3 | Gene3D:3.40.50.12280 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005506 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0008137 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009579 |
| GO:GO:0009987 | GO:GO:0015979 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0016655 | GO:GO:0019684 |
| GO:GO:0046872 | GO:GO:0048038 | GO:GO:0051536 | GO:GO:0051539 | GO:GO:0055114 | EnsemblPlantsGene:GSMUA_Achr1G11570_001 |
| EnsemblPlants:GSMUA_Achr1P11570_001 | EnsemblPlants:GSMUA_Achr1T11570_001 | UniProt:M0RZ16 | InterPro:NADH_UQ_OxRdtase_20Kd_su | InterPro:NADH_UbQ_OxRdtase-like_20kDa | PFAM:PF01058 |
| ScanProsite:PS01150 | PANTHER:PTHR11995 | PANTHER:PTHR11995:SF19 | SUPFAM:SSF56770 | TIGRFAMs:TIGR01957 | UniParc:UPI000295C59E |
| SEG:seg | : | : | : | : | : |
Description
NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr1G11570_001]
Coordinates
chr1:-:8872878..8877570
Molecular Weight (calculated)
14894.3 Da
IEP (calculated)
9.011
GRAVY (calculated)
-0.035
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MTFGLACCAV EMMHAGAARY DFDRFGVIFR PSPRQSDCMI VAGTLTNKMA PALRKVYDQM PEPRWVISMG SCANGGGYYH YSYSVVRGCD RIVPVDIYVP
101: GCPPTAEALL YGVLQLQKKI NRRKDFLVWW TK
101: GCPPTAEALL YGVLQLQKKI NRRKDFLVWW TK
001: MAMITRNTAT RLPLLLQSQR AVAAASVSHL HTSLPALSPS TSPTSYTRPG PPSTSPPPPG LSKAAEFVIS KVDDLMNWAR TGSIWPMTFG LACCAVEMMH
101: TGAARYDLDR FGIIFRPSPR QSDCMIVAGT LTNKMAPALR KVYDQMPEPR WVISMGSCAN GGGYYHYSYS VVRGCDRIVP VDIYVPGCPP TAEALLYGLL
201: QLQKKINRRK DFLHWWNK
101: TGAARYDLDR FGIIFRPSPR QSDCMIVAGT LTNKMAPALR KVYDQMPEPR WVISMGSCAN GGGYYHYSYS VVRGCDRIVP VDIYVPGCPP TAEALLYGLL
201: QLQKKINRRK DFLHWWNK
Arabidopsis Description
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q42577]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.